| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2848 |
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| Symbol | |
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| ID | 4478723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3408620 |
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| End bp | 3410317 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727454 |
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| Product | hypothetical protein |
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| Protein accession | YP_870481 |
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| Protein GI | 117921289 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
[COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTA GGGTCCACAT TAAGTATTTC TATCTGTTCG GAGCGCTGCT ATTTGGCTAT
TTTGCCGTAA CGGGGCATTC TCCCATTCTC ACCTTTATTT GGGCATGGAG CAGCCTTTCC
CTCGCCCTTG TCGGCTCGGC CTATTGGTTT AATCTCGCCA GTATTTTTAG AAAACGTCAG
GATGGCTCCA TCCCTTGGTA TATTCGCTGG GGCTTTATTC CGTTTTTATT AGGATGCCGA
CTCTATAATC TCTGGGCGCG GCGCCGCGAT AGCGTGCCTT CAATGCAAGC CATTGATAAA
TATCTATACT TGGGTAGCCG CTTAAGCGCT GCCGATTTAC CTAAACTGAA TCGTTATGGC
ATTACCGCTA TTTTAGATGT CACCGCCGAA TTCGACGGCC TCGATGTGTC CCTGTATGAA
GAGCATATCG ACTATCTGAA TATCCCTATT CTTGACCACA GCGTGCCGAC TAGCGCCCAA
TTAAATCAGG CGATTAACTG GTTACACCGT CAAGTACGCG CCCAAAAGCG GGTATTAATC
CACTGTGCGC TCGGCCGCGG GCGCTCCGTA ATGGTGCTGG CCGCTTATCT TGTGTGCCGC
CGTCCCGAAC TCAGCTTCGC CGAGGTGCTG CAACAGATTA AAAGCATTCG TAAAACCGCA
GGGTTAAATC GCTGGCAACT CAAAGCGCTG GAGCAGATGT ACACTCAAGG GGAAATCAAA
CTGCATAAGC GAGCCTGGAT TATCGCCAAT CCCGTCTCTG GCGCGGGTAA ATGGCAGAGC
CATGGCGAAC AAATTTGCAC TGAGCTGAAA CGCTATTTTG AGGTGCAGTT AGCGCTCACC
ACGCCAGAGA TTAGCGCCCA AACCCAAGCG AAAAAAGCCC GACTTCAGGG CGCCGATATC
ATCATCGCTT GCGGGGGCGA TGGCACAGTC ACAGAGGTCG CGGCGGAGAT TATCGACACC
GATATCACCT TAGGCATTAT CCCGCTAGGC ACCACTAATG CCCTGTCACA CGCCCTCTTT
GGTTTAAGCA GTAAGCTCAA TGCCGTCTCC CAAGCCCTTG ATAATATTAT CCAAGGCCAG
ACACAGACTA TAGACACGGC GCGTTGCAAT GAGCGGCTGG TGTTACTGCT GGTCGGCATT
GGGTTTGAGC AGCAAATGAT TGAGTCGGCG AGTCGCGAGC GTAAAAATGC CCTCGGCCAA
CTCGCCTACC TCGATGGTTT GTGGCGCGCG GTGAACACCG ACACCAACCT CGAGTTGCAG
CTGACTTTAG ATGACCAAGC CCCAATGGCA GTGCAAACCC ACAGCCTAGT GGTTGCCAAT
GCCGCACCTT TTACCAGCTT ACTCGCCCAA GGTAAGGGCG AACCCAATAT GACCGACGGC
TTGTTGGATA TCACTTGGTT AGATTCAAAT AATGAGCCAA ATGAACAGCT TATCAGTCTG
GCTGAACTGG CTTTTACCGG CTGGATTAAA GAGGCCACCA ATAGCGACTC TGCGCCCTCG
GCCAACACGG GCAAAGTGAA ACATGCCCAT GCTAAAAGGG TGAAGATCAG CAGTCAGCCC
CCATGCAAGT ATGTGATTGA TGGCGAGATT TGTGAGCCGG AGGAACTCAA TATCGATATC
CTGCCCGCCT CTTTGAAGGT GTTTGTGCCC TATCAAGCGC AAAATGCTGA ACCGCAGTCA
GAATCCAAAA TAAGCTAA
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| Protein sequence | MLSRVHIKYF YLFGALLFGY FAVTGHSPIL TFIWAWSSLS LALVGSAYWF NLASIFRKRQ
DGSIPWYIRW GFIPFLLGCR LYNLWARRRD SVPSMQAIDK YLYLGSRLSA ADLPKLNRYG
ITAILDVTAE FDGLDVSLYE EHIDYLNIPI LDHSVPTSAQ LNQAINWLHR QVRAQKRVLI
HCALGRGRSV MVLAAYLVCR RPELSFAEVL QQIKSIRKTA GLNRWQLKAL EQMYTQGEIK
LHKRAWIIAN PVSGAGKWQS HGEQICTELK RYFEVQLALT TPEISAQTQA KKARLQGADI
IIACGGDGTV TEVAAEIIDT DITLGIIPLG TTNALSHALF GLSSKLNAVS QALDNIIQGQ
TQTIDTARCN ERLVLLLVGI GFEQQMIESA SRERKNALGQ LAYLDGLWRA VNTDTNLELQ
LTLDDQAPMA VQTHSLVVAN AAPFTSLLAQ GKGEPNMTDG LLDITWLDSN NEPNEQLISL
AELAFTGWIK EATNSDSAPS ANTGKVKHAH AKRVKISSQP PCKYVIDGEI CEPEELNIDI
LPASLKVFVP YQAQNAEPQS ESKIS
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