Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2751 |
Symbol | |
ID | 4478236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3282831 |
End bp | 3283529 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639727357 |
Product | TetR family transcriptional regulator |
Protein accession | YP_870384 |
Protein GI | 117921192 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTA TTCCCCGTCG CCCAAGAGGT GTGGTTCCCT TTGCCGCCCA ACCTGGGCAG TCCATGACTG CGGGTCGCCC GAAAGGCAAC TCTGATGCGC GTCAACGGCT GATCGCCGCC GCGGTGACGC TCTTTAGTGA ACGCAGTTAT CCCACTGTTT CTACCCGTGA AATAGCCCGT GAAGCCGAAG TGGATGCGGC GCTTATCCGC TATTACTTTG ACTCTAAAGC TGGCTTATTC GAGCAGATGG TGCGGGAAAC CCTCGAGCCT GTGATTGCGC GTTTGCGTGA AATCTCCAGC GCTCAAGCAC CCAATGATAT AGGTGAACTG ATGCAAACCT ATTATCGGGT GATGGCACCT AATCTTGGAT TACCCCGATT AATAGTACGT GTGTTGCAGG AAGGCGATGG CACAGAGGCC TATCGAATTA TGTTGTCGGT GTTTGAGCAA ATTCTGTCCC TCTCGCGCCA ATGGGTCGAG TCGGCATTAG TGAATGCGGG ATTACTCAAA GAAGGGCTCG ACCCCAATTT AGTGCGCCTG AGTTTTATCA GTTTGATGGT GTTTCCGCTG ATCGCGCCCC CGGTTTTAAT GCGTCAGTTT GGCCTGTTTA GTGCCAATAC TGCGGATTTA CAACGCTTAG CGCTGCACAA TATGCAGGTG TTTACCCAGG GTGTATTACG TGAACCTAGG AGTGAATGA
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Protein sequence | MSLIPRRPRG VVPFAAQPGQ SMTAGRPKGN SDARQRLIAA AVTLFSERSY PTVSTREIAR EAEVDAALIR YYFDSKAGLF EQMVRETLEP VIARLREISS AQAPNDIGEL MQTYYRVMAP NLGLPRLIVR VLQEGDGTEA YRIMLSVFEQ ILSLSRQWVE SALVNAGLLK EGLDPNLVRL SFISLMVFPL IAPPVLMRQF GLFSANTADL QRLALHNMQV FTQGVLREPR SE
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