| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2682 |
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| Symbol | |
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| ID | 4478449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3206661 |
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| End bp | 3207893 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727288 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_870315 |
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| Protein GI | 117921123 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.250773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGTTT TGGATCAACA CATCGCTAAA CAAATTGTGA GTCGCACCAT GAAAATCATT
GGGCACAATA TCAATGTGAT GAATGGTCAG GGCGTGATCT TAGGTTCGGG CGATCCCAAA
CGTATTGGCT CGACCCACGA GGGCGCGCTG CTTGCCATCG CCCAAAACCG CAATGTGGAA
CTGAGTGAAG AAGTGGCCTC TGGCTTATAT GGCGTCAAAC CCGGCATCAA CTTACCCCTG
CATTATCAAG GGCAAATTAT TGGGGTGATT GGTATTACTG GCGATCCGGC CGAGTTAACC
CACTACGGCG AGCTGCTCAA AATGACCGCC GAGATGATTG TCGAGCAAGC CAACCAGCAG
GATCAGCAGC AGTGGGAAAA TCGCCAGCGT GAGGAATTTA TTCTGCAGTT GATTAAGGCG
CAAACCGATG ACGATGAACA ATTGCATCGC TGGGCCAAGC AACTCGACAT CGATATCAGT
CTGCCGCGAG TGGCCGCCAT TATTGAAGTC AGTGAAAAAC AATCCGCGCC TACCCAACAC
ACATCCGCCG CGTTTTCGTC ATTAGTCCAG AGCGAGCAAA ATGCAGACGA GCGTAACCCC
AGAGTCAGCG AAATCCTCAA GCAAGTGCTG CATTTGCTGC AAAACCCCGA TCGCGGCAAC
TTGATTGCCA TGACCTCTAT GTCGCAACTG GTGATCTTAA AACCCGCCTT TCTGGATGGT
AAACAATGGG ATCCCGAGCT TGAAAACCAG CGTATCGATA AACTGCTGCA GCGCTTACCG
GCACAGATGG ATTTACATTT TAAAATAGCC CTTGGGCATT TTTTCCCTGA AAAAGGCGGC
ATTGCCCGCT CCTACCAAAC CGCGCAGGAA ACCTTAAACT TAGGCAAACA GCTTAACCCC
GAGGGCACAA AATACCTGTT TGAAGACTAC TCCTTGCAAG TGCTGTTATC GGGACTCAAG
CATGATTGGC GTGGTCAGGC GCTGGCCAGC CCCTACCAAC AGCTAGCCAA GGCCGATAAA
AATGGCCAGC TACGTAAGAC TTTAGCCGCC TATATCACTC ACTTTGGTGA TGCCCAGCAA
TGTGCTAATG CATTGTTTAT TCACCGAAAT ACCCTAAGGT ATCGGTTAGA TAAAATTCAG
CAACTCACCA AGAGTGATAT CCATTCTCTC CACGGATTGT TAAGTCTTTA TCTTGGGCAG
TTGATAGATA CCTCAAATTA CCGACTCGAG TAG
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| Protein sequence | MYVLDQHIAK QIVSRTMKII GHNINVMNGQ GVILGSGDPK RIGSTHEGAL LAIAQNRNVE
LSEEVASGLY GVKPGINLPL HYQGQIIGVI GITGDPAELT HYGELLKMTA EMIVEQANQQ
DQQQWENRQR EEFILQLIKA QTDDDEQLHR WAKQLDIDIS LPRVAAIIEV SEKQSAPTQH
TSAAFSSLVQ SEQNADERNP RVSEILKQVL HLLQNPDRGN LIAMTSMSQL VILKPAFLDG
KQWDPELENQ RIDKLLQRLP AQMDLHFKIA LGHFFPEKGG IARSYQTAQE TLNLGKQLNP
EGTKYLFEDY SLQVLLSGLK HDWRGQALAS PYQQLAKADK NGQLRKTLAA YITHFGDAQQ
CANALFIHRN TLRYRLDKIQ QLTKSDIHSL HGLLSLYLGQ LIDTSNYRLE
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