Gene Shewana3_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2563 
Symbol 
ID4479225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3064372 
End bp3064896 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID639727166 
Producthypothetical protein 
Protein accessionYP_870196 
Protein GI117921004 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000529312 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG TAAAGATACC GGTTTCAATT GATCCTTTTC GCGCCGCCTC GAGCCGTTCT 
ACCTATGAGG GGATAGTGCC TGGGCAGCAA TTGAGAAGAT TAAATGAGTT ATGTGCCGGC
GACTGTTCCG ATGTGGCAGT GTCGATTGAA TGTGGCGTAG ATTTGCAGGG GATAGTCTAC
CTGAAAGGGA AGGCTGTGAC GGAGCTCACT CTGGTTTGTC AACGTTGCAT GACGCTATTT
ACCACTGAGG TTACGGTCGA GTTTTGCTTC GGTCCATGCC GGACTAAGGC AGAAATCGAT
GAGCTCCCGG ATGCGTATGA CCCAATTGAG TGCAATGAGA TTGGCGAAGT ACGTCTGCAT
CAATTGATCG AAGATGAATT GATAGTCGCT ATGCCTATCA TCCCGATGCA TGAAGAAACT
GATTGCAACA CCGGGTCAAT GGACATAGTT GTAGGCGAGA TCGAACCCGC TCAAGAGGAG
CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
 
Protein sequence
MQTVKIPVSI DPFRAASSRS TYEGIVPGQQ LRRLNELCAG DCSDVAVSIE CGVDLQGIVY 
LKGKAVTELT LVCQRCMTLF TTEVTVEFCF GPCRTKAEID ELPDAYDPIE CNEIGEVRLH
QLIEDELIVA MPIIPMHEET DCNTGSMDIV VGEIEPAQEE RPNPFAVLEK LKSK