| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2543 |
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| Symbol | |
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| ID | 4479205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3040145 |
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| End bp | 3041566 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639727146 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870176 |
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| Protein GI | 117920984 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000111562 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAG GGATTATGAT TAGTACAAAA CTCAGTTGGG CACTGGTTCG TCAATCCTGT
TCACTGGCAA CATTGATATT TGTTGTCCTG CTGCTCATTC TCTTACCCTT CAAAATCGAT
AAGGAACATA AGGCTTTCGT TCATTTCCTG AGGGCAAAAC ACACTGTGCC AAGTTATGTG
GAGCTGCTTG GGAAAGGATT GTCGTTACAC GATATTATTG ATTTTGATAG CGCGCTGCTT
GCGCCCTTTA AGCTCGACCC TTCGCGCTTA TTATTGCCTC CTGGAAGTCA TTTACTGCCG
GAAGAAGAGC AAATCATTCG TTATTTTGAC TACCTCTATT CGAGTCGCAA GAATGCGGTT
CGCGGGGCTT TTGTCTATAT CGGCTTATAT AAAAGCAATG CCTTGTATGT GGCATCCCCA
ATTCCTGAAG AAGTGAAAAA CCGATTAATT CACGATCACA TTTTGACCAA TGAGTTTTGT
CAGCGGCTGC ATTATTGTAG TAAGGACGCG TCGGCGGAGT CCTTGGCGGA CGGTATCGTG
TTATCGATTC CTTATGTTGA TGAAATTACA GGAAATGTAA TTTTCTCTAT GGCGGCACCG
ATTTCATCTT CCCACGATCC TGCGCACCTG TGGGGGGATG TGATTGCCGA TACGGCATTT
ATGGCATCGG GATTTATGCG GGGTAAAGGC TATGAGTCGG TGATGACTCC TTATGGCACA
GATATAGTGA TCACTGGCGA CAGCCTCTGG ACGCGTATTA CGCCAGAGTT CTTGTTTTAT
CCCATGAGTA ATCATCTGGA TAACCTCACC ACATTAACCT ACAAAGTCAG TGTATTACGC
TTTGTGGTTC AGTATGTTCC CTTATGGTTC TTGTTGTGCG TGTTAACTGT TATCTTCCAA
CTCAGATATA TGCGCCTTAA ACAGCTGCGA GCAGAACGTC AACGGTTCGG CGAAGCGATG
CTGCAGGATC CTTTTACTAA AACCTACAAT AAGAAGATCT ATGAGACGCT GACATTTAAG
GCGGCGACCG AGGGCCTGTA TGCGGTGATC TGTATCGATG GCGATAAAAT CAAAACCATC
AATGACACCT ACGGACATAA ACTGGGCGAT ATGGCGATTC TGCAAATTGT TGAAGCCATG
CGGGCGGTAT TTCGGGAGAA TGACTTGTTT ATCCGCACTG GTGGGGACGA ATTTGTGGTG
ATCCTCAGTA ATTGCTCCCA GGATAAAGCG TTACAACTTG CTCATAAGCT TAAAGAGAAT
GTTGAGCAGC GCCAGTTCTT AAGCATGCTA ACGGTATCGT GCGGGGTGGC AGATTCGAGC
GGCTATCCAT CCTTTGACTC AGTGTTACAG GCGGCGGATA AGGCTTTATA CGTGGATAAG
GCCAAAAAGG GTGGGCATGT GTCCGATAAT AGCCTGCGCT GA
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| Protein sequence | MIAGIMISTK LSWALVRQSC SLATLIFVVL LLILLPFKID KEHKAFVHFL RAKHTVPSYV
ELLGKGLSLH DIIDFDSALL APFKLDPSRL LLPPGSHLLP EEEQIIRYFD YLYSSRKNAV
RGAFVYIGLY KSNALYVASP IPEEVKNRLI HDHILTNEFC QRLHYCSKDA SAESLADGIV
LSIPYVDEIT GNVIFSMAAP ISSSHDPAHL WGDVIADTAF MASGFMRGKG YESVMTPYGT
DIVITGDSLW TRITPEFLFY PMSNHLDNLT TLTYKVSVLR FVVQYVPLWF LLCVLTVIFQ
LRYMRLKQLR AERQRFGEAM LQDPFTKTYN KKIYETLTFK AATEGLYAVI CIDGDKIKTI
NDTYGHKLGD MAILQIVEAM RAVFRENDLF IRTGGDEFVV ILSNCSQDKA LQLAHKLKEN
VEQRQFLSML TVSCGVADSS GYPSFDSVLQ AADKALYVDK AKKGGHVSDN SLR
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