| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2538 |
|---|
| Symbol | |
|---|
| ID | 4477594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3035478 |
|---|
| End bp | 3035891 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639727141 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_870171 |
|---|
| Protein GI | 117920979 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000724795 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.769901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG ACAGTCGATT ATCGCGTGTA TTACACATTC TTGTGCATTT AGATGCATTT
GCAACGCAGC TCACTTCCGA AAAAATGGCC GAAATGATTG GAACTAACCC CGTGGTGGTT
CGCCGAACAA TGGCGCTACT GCGAGATCAA GGTTATGTCA CCTCAAGCAA AGGGCATGCT
GGCGGCTGGG CTTTGGCAAA ACCACTTGCC AAGATCACTC TGCTGGAAAT TCATCAAGCA
CTAGGAGACA GTGCCTTTTT TACGATTGGC CTGACTGATG AACACAATAA CTGCCCTATT
GAAATAGCCG TCAACGACGC ATTAAAGGAC GTTATGCAAG AAGCTGAGTC ATTGTTGCTG
CAACGATTTG GTGAGATCAC CTTAGATAAA TTGGCGTTTA CTCAATCGGT ATAA
|
|---|
| Protein sequence | MRKDSRLSRV LHILVHLDAF ATQLTSEKMA EMIGTNPVVV RRTMALLRDQ GYVTSSKGHA
GGWALAKPLA KITLLEIHQA LGDSAFFTIG LTDEHNNCPI EIAVNDALKD VMQEAESLLL
QRFGEITLDK LAFTQSV
|
|---|
| |