Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2431 |
Symbol | |
ID | 4477239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2914549 |
End bp | 2915538 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727028 |
Product | diguanylate cyclase |
Protein accession | YP_870066 |
Protein GI | 117920874 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.966679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTAG TACTCCCTTT AATTGCACGG CTGCGAACCA TGACAAAAAT TGCCCCACAA CACGCCGAAA CGGGTTCCGA TACCAACCAT AGTCAAGCCA TTGATACTAT TTTAAATAGT CTCGATGCGC TGGTTTATGT CTCTGATTTA GATACCTATG ATTTACTCTA TCTCAATGAC TACGGTGTAT CGGTTTGGGG TGAGGCAAAA GGTAAAAAGT GCTATCAAGT GCTGCAATCG GCACAACACT CGCCTTGTCA ATTTTGTACT AACCCTAAAC TATTGGATGA AAAGGGAAAT CCTGCTGGCG TTCATGTGTG GGAGTTTCAA AACACCCAAA ATGGCCGTTG GTACCAATGT CGCGATCAAG CCATTCATTG GACCGATGGC CGATTAGTTA GAATCGAAAT CGCCACCGAT ATCACCGAAC GCAAACAAAT GGAGCAAGCG CTGATAGAGG CAAAATCCAC GGCCGAGCGC CTTGCCGACA CTGACGAACT GACCCAACTC TATAATCGCC GGGCTTTTTT CAATCTCGGT CGCCAAATTG CGCAACAAAC AGCACAACCA CTGGCCTTTA TCATGTTCGA TATTGATCAC TTTAAGCGGA TTAACGACCG CTGGGGCCAT GCGATGGGTG ATGCGGCGCT TATCCATATC GCAAGATTGA CGCAAACCAA ACTGAGAACA AATGATATTC TTGCTCGTTT AGGCGGCGAA GAGTTTGGGC TGATTTTACC CAACACTCAC CATGAGCAAG CATGGCAAGT GGCGGAGTCA ATTCGACACG GGTTTGATAC GCAGCCACTA CAGCTTAACG GCCACAGCAT CCACTGCACA GCAAGCTTTG GCATATCATC CTTGGTCTTG CCTCAAATCA ATCATCCCGA TGAGGCACAA ACCCTCTTGG AAACCCTATT CAATAATGCC GATCAGGCCA TGATGCAAGC CAAGCGAGCA GGTAGAAATC AAGTCTGTGA TGCGGTCTAA
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Protein sequence | MLLVLPLIAR LRTMTKIAPQ HAETGSDTNH SQAIDTILNS LDALVYVSDL DTYDLLYLND YGVSVWGEAK GKKCYQVLQS AQHSPCQFCT NPKLLDEKGN PAGVHVWEFQ NTQNGRWYQC RDQAIHWTDG RLVRIEIATD ITERKQMEQA LIEAKSTAER LADTDELTQL YNRRAFFNLG RQIAQQTAQP LAFIMFDIDH FKRINDRWGH AMGDAALIHI ARLTQTKLRT NDILARLGGE EFGLILPNTH HEQAWQVAES IRHGFDTQPL QLNGHSIHCT ASFGISSLVL PQINHPDEAQ TLLETLFNNA DQAMMQAKRA GRNQVCDAV
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