Gene Shewana3_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2424 
Symbol 
ID4477232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2906396 
End bp2907271 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content49% 
IMG OID639727021 
Productisocitrate dehydrogenase (NADP(+)) 
Protein accessionYP_870059 
Protein GI117920867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGT TTGTAAAAGA TTTAACCGTG ATCGATTTTT CCTATCTTTG CCCCAAGCGT 
GGCATGGTAG GGGAAAGCTG GATTGTCGAT GTGGTATTAG AAGGCGGCCT AGACGAGCAA
AATATGGTGC TCGATTTCGC TAGAGTGAAA CGAACCATTA AGCAGACTAT TGATGCGGTG
GCCGATCATC GTTTATTGGT GCCGACCGCC TACAGTGGCG TGCGTTGGCA GCAGCAGGGC
GATCGGGTGT GGATGGATTT CGATAGCGCG CTCGGTGAGA TCCACTTAGC TTGTCCTTCC
CAAGCCTTTG CACTCGTTCC ATCGGAACAG ATTGATATTC CAAGCGTTAA TGCCTTTTTA
CAAAAAGCAC TGCGGGAAAC TCTGCCCGAT AATGTTGAAG GTATTAGCCT CACCTTAAGA
CATGAGATCC TGAACTCGCC TTACTATCAT TACAGCCATG GTTTACGTAA ACACGATGGC
AATTGCCAGC GGATAGCCCA TGGTCATCGC AGCCCGGTTC AAGTGTTTGA AAACGGCATT
CCGGCACCGA AATGGGATGA ATATTGGGCC AAGCGTTGGC ACGATATCTA CCTCGGTAGT
GAAGAGGATT TAGTGTCAGT AAAGACCTTA AACCTGTCGC CACAAACGCG GATCAGTGAT
GACAGCCATT ATGGCTTTCA CTATCAAGCG CCGCAGGGGG ATTTCCAACT GGCCATGCCC
AAGGAATGTT GTGATTTGAT CCCGCACGAT ACCACGGTTG AATTGCTGGC CGACTATATG
GCGACCACCT TAGTGGCAAA AGTGCCTTCA AGCCAATTTA CTGTGATTGC CTACGAAGGC
GTGGGGAAAG GCGCCATCGT AAGTAAAGGC AATTAA
 
Protein sequence
MQLFVKDLTV IDFSYLCPKR GMVGESWIVD VVLEGGLDEQ NMVLDFARVK RTIKQTIDAV 
ADHRLLVPTA YSGVRWQQQG DRVWMDFDSA LGEIHLACPS QAFALVPSEQ IDIPSVNAFL
QKALRETLPD NVEGISLTLR HEILNSPYYH YSHGLRKHDG NCQRIAHGHR SPVQVFENGI
PAPKWDEYWA KRWHDIYLGS EEDLVSVKTL NLSPQTRISD DSHYGFHYQA PQGDFQLAMP
KECCDLIPHD TTVELLADYM ATTLVAKVPS SQFTVIAYEG VGKGAIVSKG N