Gene Shewana3_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2392 
Symbol 
ID4479627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2870854 
End bp2871852 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID639726989 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_870027 
Protein GI117920835 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.988511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA CCAGAGAAAA TACCCTTAAA CCCCTTCGCC GTTTAAGACG CCTACGCCGC 
ACTGAAGCCA TGCGTGACCT AGTGCGTGAA ACCCAGATTT CCCTAAGCGA CTTAGTCCAC
CCACTCTTTA TTGAAGAGCA CATCACCCAA GCCGTGCCCA TTTCAACCTT GCCGGGGATC
AGCCGTCTGC CCGAGAGTGC GCTTGCCGAT GAAATTCAAA GGCTTTACGT ATTAGGGATC
CGCTATGTGA TGCCCTTTGG CATTTCCCAC ACCAAAGATG CACAGGGCAG CGACACTTGG
GATGACAATG GCTTACTCGC ACGGATGATC CGCACCATCA AAACCGCTGC GCCAGAGATG
ATGGTGATCC CCGATATTTG TTTTTGTGAA TATACCGACC ACGGACACTG CGGCGTATTG
CACCATGACG AAGTCTGTAA CGATCAAACC GTGGCTAACT TAGTTAAACA ATCCATCACC
GCAGCCAAAG CGGGAGCCGA TATGCTGGCG CCATCGGCGA TGATGGACGG CCAGATTAAC
GCCATTCGTC AAGGGCTGGA CGAGGCAGGC TTTGAGCACA TCGCCATTTT GGCCCATGCA
GCCAAGTTCG CCTCTTCCTT CTACGGGCCT TTTAGGGCCG CGGTGGATTG CGAACTTAGC
GGAAACCGTA AGGGCTACCA GCTCGATTAC GCTAATGGTC GCCAAGCCTT GCTCGAAGCG
CTGCTCGATG AAGAGGAAGG CGCGGATATT CTGATGGTTA AACCCGGCAC GCCCTATTTG
GATGTGTTAA GTCGCCTAAG ACAGGAAACC CACCTTCCCT TAGCGGCTTA TCAAGTCGGC
GGCGAATATG CCGGCATTAA GTTTGCCGCA CTGGCGGGCG CCCTCGATGA ACGCGCCGTC
GTCACCGAGA CCTTTATCGG GTTAAAACGT GCTGGCGCCG ATTTAATTGT CAGTTATTAC
GCAAAACAGT ATGCCGAATG GTTAGCGCAA TCCCGCTAA
 
Protein sequence
MSSTRENTLK PLRRLRRLRR TEAMRDLVRE TQISLSDLVH PLFIEEHITQ AVPISTLPGI 
SRLPESALAD EIQRLYVLGI RYVMPFGISH TKDAQGSDTW DDNGLLARMI RTIKTAAPEM
MVIPDICFCE YTDHGHCGVL HHDEVCNDQT VANLVKQSIT AAKAGADMLA PSAMMDGQIN
AIRQGLDEAG FEHIAILAHA AKFASSFYGP FRAAVDCELS GNRKGYQLDY ANGRQALLEA
LLDEEEGADI LMVKPGTPYL DVLSRLRQET HLPLAAYQVG GEYAGIKFAA LAGALDERAV
VTETFIGLKR AGADLIVSYY AKQYAEWLAQ SR