| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2380 |
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| Symbol | |
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| ID | 4479615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2860378 |
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| End bp | 2861379 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726977 |
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| Product | putative transglycosylase |
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| Protein accession | YP_870015 |
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| Protein GI | 117920823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00018447 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.231561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGA CCCTCCTTCA ACGCGTTGCA GCATGTACAT TGATTTTCTT GCCCTTGATA
AGCCATAGCG CGCTAGGGCA AGACGCCTCC TTCAACGATT ACCTCCTTAA GCTTAAGCAA
GAGGCGAGTG CCCAAGGCAT TAGCCAAGCG ACGATCAATA CGGCTTTTCC GCAGATAAAA
CGCTTTAAAA AAGCCAATGT GGCCGCAGCG CCAAGCCAAT CTAAAACCCT TGAAACCTAT
TTGCCAGAAG TGGTGCCGGA ATGGAAGGTG GATACGGCGC GCGTACTCTT TAACGAGCAT
GAAGTGCTAT TGAGCAATAT TGCCGACAAG TATCAAGTGC AGCCGCGGTT TTTAGTGGCG
CTCTGGGGCT TAGTGTCTAA CTTTGGGGAT GCGTCGGGGG ATTATCCTGT ACTGTCTGTG
ATGGCGTCGT TAGCCTTTAC TGGCGAAGAT ACGGCGCGTT ACCAACGGGA GTTTATGGCT
GCGCTTTCCA TCATGGATAA AGAGCAACTT AAGTTTGATG ATCTTAAAAG CAATGACAAA
GGCTTTATGG GGCAAACCCA ATTGCTACCG AGTGAATATT TAGCCTACGG CCAAGATGGC
GACGGTGATG GTAAAAAAGA CATTTGGCAT AATGTGGCCG ATGCGTTTGC CTCTGCCGCG
AATCTGCTTA AGCAGCAGGG CTGGAATGGT GAAGATACTT GGGGACGTCA GGTTCAAGCA
CCGGCGGATA TTAAGACCGA GTTTATCGGA CTCAATCAAT CACAGACCCT AGCCAAGTGG
CAACAGCTCG GTGTCAGGCG GTTCGATAAT ACGGATTTAC CGAATCGTGA GGATATTCAT
GCTTCGCTTA TCATGCCCGA CGGTGTTAAG GGCCGAAAAT ATCTGGTCTA TGGCAATTAC
CGCGCCTTAA TGCACTGGCA AGCGGTGAAT TATTTAGGCG AGGGCGATTA TTTTGGCATC
TCTGTGGTGC ATTTATCGGA GAGAATTAAG ACTCCCCAGT AA
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| Protein sequence | MPKTLLQRVA ACTLIFLPLI SHSALGQDAS FNDYLLKLKQ EASAQGISQA TINTAFPQIK
RFKKANVAAA PSQSKTLETY LPEVVPEWKV DTARVLFNEH EVLLSNIADK YQVQPRFLVA
LWGLVSNFGD ASGDYPVLSV MASLAFTGED TARYQREFMA ALSIMDKEQL KFDDLKSNDK
GFMGQTQLLP SEYLAYGQDG DGDGKKDIWH NVADAFASAA NLLKQQGWNG EDTWGRQVQA
PADIKTEFIG LNQSQTLAKW QQLGVRRFDN TDLPNREDIH ASLIMPDGVK GRKYLVYGNY
RALMHWQAVN YLGEGDYFGI SVVHLSERIK TPQ
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