Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2344 |
Symbol | |
ID | 4478101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2820383 |
End bp | 2821666 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726939 |
Product | arsenical pump membrane protein |
Protein accession | YP_869979 |
Protein GI | 117920787 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0116158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00889141 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGGTTGG CAGGGGCGAT TTTTGTTCTC ACCATAGTGT TAGTGATTTG GCAACCTAAG GGTTTAGGCA TAGGTTGGAG TGCCACCTTG GGCGCCGTAT TGGCCTTGCT ATTAGGCGTA GTGCAGTTAG GGGATATTCC CGTGGTGTGG AATATCGTCT GGAATGCGAC CGCCACCTTT ATCGCCGTGA TCATCATCAG TTTATTATTG GATGAGTCAG GATTTTTCGA ATGGGCCGCG CTGCATGTGG CCCGCTGGGG TAAAGGTCGT GGCCGTTTAC TCTTTACTTA CATAGTGTTA CTCGGTGCTA CCGTTGCAGC CTTATTCGCC AATGATGGCG CGGCGCTGAT CCTCACCCCA ATCGTGATTG CGATGTTACT GGCGCTGGGC TTTAGCGCCG GAGCCACCTT AGCCTTTGTG ATGGCCGCAG GTTTTATTGC CGATACCGCA AGTTTGCCGT TAATCGTCTC TAACCTAGTG AATATCGTTT CCGCGGACTT TTTCAAGATA GGCTTTAACG AATATGCCGC TGTAATGGTG CCCGTCGATA TTGCCGCGAT TAGCGCCACA TTAGTGATGC TGCATGTGTT TTTCCGCAAA GATATTCCAG CCACCTACGA CCTAGAAAAA CTGCGCGAGC CTAAGGCCGC AATTCGCGAC CTCAACACCT TTAAAACCGG TTGGGGAGTT TTAGTCTTAC TCTTAGTCGG CTTTTTTGGC CTAGAACCCC TCGGCGTGCC CGTGAGTTTA GTTGCTGCCG TGGGCGCGCT TATTCTGTTT GTGGTCGCCA AGAAAGGCCA TGGGATAGAT ACCACTAAGG TACTGCGCGG CGCACCATGG CAAATAGTGA TCTTTTCACT GGGTATGTAT CTGGTGGTTT ATGGTCTGCG TAACGCAGGC TTAACGGATT ATCTATCTCA CGTGTTGGAC AGCTTGGCAG CACAAGGACT TTGGGTTGCC ACTATGGGCA CAGGTTTTTT AGTCGCCTTT TTATCTTCCA TCATGAACAA CATGCCAACC GTGTTAGTCG GCGCCCTGTC GATAGACGGT AGCAATGCAA CCGGCGTGAT TAAAGTAGCC ATGATCTACG CTAACGTGAT AGGCAGCGAT TTAGGCCCCA AAATCACCCC TATCGGCAGT TTAGCAACCC TGCTATGGCT GCATGTGCTG GCGCAGAAAA ATATCAATAT AACTTGGGGT TACTATTTCC GCGTCGGCAT AGTGATGACA GTACCTGTGC TGTTTGTCAC CCTAGCGGCA CTGGCGCTGC GCCTCTCCTT CTGA
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Protein sequence | MWLAGAIFVL TIVLVIWQPK GLGIGWSATL GAVLALLLGV VQLGDIPVVW NIVWNATATF IAVIIISLLL DESGFFEWAA LHVARWGKGR GRLLFTYIVL LGATVAALFA NDGAALILTP IVIAMLLALG FSAGATLAFV MAAGFIADTA SLPLIVSNLV NIVSADFFKI GFNEYAAVMV PVDIAAISAT LVMLHVFFRK DIPATYDLEK LREPKAAIRD LNTFKTGWGV LVLLLVGFFG LEPLGVPVSL VAAVGALILF VVAKKGHGID TTKVLRGAPW QIVIFSLGMY LVVYGLRNAG LTDYLSHVLD SLAAQGLWVA TMGTGFLVAF LSSIMNNMPT VLVGALSIDG SNATGVIKVA MIYANVIGSD LGPKITPIGS LATLLWLHVL AQKNINITWG YYFRVGIVMT VPVLFVTLAA LALRLSF
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