| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2314 |
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| Symbol | |
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| ID | 4478071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2785613 |
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| End bp | 2787742 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726909 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_869949 |
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| Protein GI | 117920757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.169067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTTTC TATTATCTAA CAACAGCAAA CGTGGCACTT ATCGCTGGCA TCAGGGATTA
ACCCTACTGG CACTCAGCAG CATTAGCACC TTTAACGCCA TGGCCGCTCA AGCAATCACT
ACTCAAGCAA CGGCGTTACA GGCAGTAGCG GCTAAAACTA TGGCTGCCAA TCCAAATGTA
GGCGAAGGCG AAATGCTGCC AGCCCATCAC CATGGCGAGC AAGCAAATAA GTTTAAACCC
GTTGTTTATC AAATTTTTAC CCGACTCTAT GGCAATAAAA ACACCACCAA TAAACCTTGG
GGCACGATTA GCGAAAACGG TGTGGGTAAA TTTAATGATA TTGATGATAC TGCACTCAAA
AGTATCAAAG ACTTAGGTGT TACCCATGTG TGGTATACGG GTGTACCCCA CCACGCCCTA
ATTGGCGATT ACAGTGCTAT TGGCGTAAGT CACGATGATC CCGATGTGGT TAAGGGCCGC
GCTGGCTCGC CCTATGCGGT TAAAGATTAT TACAACGTAA ACCCCGATTT AGCGGTCGAT
CCCGCAAAGC GTTTACAGGA GTTTCAGGCA CTTATCGAGC GCACCCACAA GCAAGGCTTA
AAGGTGATTA TCGATATAGT GCCCAACCAT GTGGCGCGTA ATTACCATTC CATCACTAAG
CCCGAGGGTG TGCACGATTT TGGTGAAGAT GATAATCAAA CCCTTGAATA TGCAAAGCAT
AATAACTTTT ACTATGTGAT TGATAAAAAG CAATCCTCAG GCTTTCAAGT GCCCGATTTG
CCTGAGAGCC TCAAACCGTT AGGCGGTGAA TCGCATCCCC TAAGTGATGG TCAATTTAAG
GAAATCCCCG CCAAATGGAC GGGCAATGGC TCACGCCTTG CTAAGCCGGA TATGAACGAC
TGGTATGAAA CCGTTAAAAT CAATTACGGT GTCCGCCCCG ATGGCAGCCA TGATTTCCCC
GCACTGCCAC CAGGTTATGC CACTCTCGGC GCCGAGCAGC ACTACGCATT TTGGCAGCAA
CATAGTCATG AATTGCCTAA CTCTTGGATC AAATTCAATC AAATTGCCCA GTATTGGTTA
GCGATGGGAG TCGATGGATT TCGTTACGAT ATGGCCGAAA TGGTACCAGT CGAGTTTTGG
AGCTATTTAA ATAGTCATAT AAAACATAGC CATCACGAAG CTTTTATCTT AGCTGAGGTC
TATAACCCCG CACTGTATCG CGACTATATT CAGCTCGGCA AAATGGACTA CCTCTACGAC
AAGGTCGATC TTTACGACAC CCTCAAAGCC ATTATGGCAG GGCAAAAAAG TACCGCGCAG
ATCGCCGCGG ATCAGGCCAA AGTACATGAT ATCGACACGC ATATGCTGCA TTTTTTAGAA
AACCACGACG AGCAGCGCAT CGCCAATGCC GCCTTTTTAG GTAGTTTAAG TGGTAATGCC
TCTACGGATG CGGTCGATCC CCGCTACGCC CTGCCCGCAA TGGTGGTGTC AGCAACCTTA
AGTACCTCAC CCACCTTGAT TTATTTTGGT CAAGAAGTAG GAGAAGCGGC GACGCAAAAC
CTAGGCTTTG GCCATGCTTC GCGCACCAGT ATTTTTGATT ATGCGGGTGT TCCCGCCCAT
CAGCGCTGGA TGAATCAAGG TAAATTTGAT GGCGGCCAAT CAACCACGGC AGAAGTCGCG
CTGCGCACCT ACTATCAAAA ATTATTGAAC CTCAGCACAG GGAAAAATGC GCCCGCGCTC
TTAGGACAAT ATGACTCGCT AGATGCTGCT AACCGCAGCG CGGTATCGGC CGCAAAGGCT
AGCAATAAGG CTAACAATAA GACAAACAAT GGCAGCGCAA CGGGTTATGA TGACTCAACC
TTCGCCTTTG TCCGCTTTGA GGCTAATACC GCCAATAACA AAGGTCAAAA GCTGATTATT
GTCAGTAACT TTAGTCAAAC CCAAGCCAAG TTATTTTCAC TTAAACTGCC CCAATCTCTG
ATTGCGCAAT GGCGGTTAAC CGATGCCACC TATCCGCTTA AGGATTTGCT GGAAGACCAT
GAGGCGCAGT TGGTTGTCGA ACAAGGCGAA GGACAAGTTA AATTGCAGCT AGCGCCTCTC
TCCACAGCCA TTTTTGAACT CGCCCATTAG
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| Protein sequence | MNFLLSNNSK RGTYRWHQGL TLLALSSIST FNAMAAQAIT TQATALQAVA AKTMAANPNV
GEGEMLPAHH HGEQANKFKP VVYQIFTRLY GNKNTTNKPW GTISENGVGK FNDIDDTALK
SIKDLGVTHV WYTGVPHHAL IGDYSAIGVS HDDPDVVKGR AGSPYAVKDY YNVNPDLAVD
PAKRLQEFQA LIERTHKQGL KVIIDIVPNH VARNYHSITK PEGVHDFGED DNQTLEYAKH
NNFYYVIDKK QSSGFQVPDL PESLKPLGGE SHPLSDGQFK EIPAKWTGNG SRLAKPDMND
WYETVKINYG VRPDGSHDFP ALPPGYATLG AEQHYAFWQQ HSHELPNSWI KFNQIAQYWL
AMGVDGFRYD MAEMVPVEFW SYLNSHIKHS HHEAFILAEV YNPALYRDYI QLGKMDYLYD
KVDLYDTLKA IMAGQKSTAQ IAADQAKVHD IDTHMLHFLE NHDEQRIANA AFLGSLSGNA
STDAVDPRYA LPAMVVSATL STSPTLIYFG QEVGEAATQN LGFGHASRTS IFDYAGVPAH
QRWMNQGKFD GGQSTTAEVA LRTYYQKLLN LSTGKNAPAL LGQYDSLDAA NRSAVSAAKA
SNKANNKTNN GSATGYDDST FAFVRFEANT ANNKGQKLII VSNFSQTQAK LFSLKLPQSL
IAQWRLTDAT YPLKDLLEDH EAQLVVEQGE GQVKLQLAPL STAIFELAH
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