| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2249 |
|---|
| Symbol | |
|---|
| ID | 4477674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2710401 |
|---|
| End bp | 2711054 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639726844 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_869884 |
|---|
| Protein GI | 117920692 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.200806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGTCGC AAGTAAAAGA TAACTATCAA ATCACAGTGG CGACCTTTGA TAAACATGCC
AAACAGTATC AGGACAAATA TCTGGAATTT GCCCCATACA CCCAAAGCTA TGATTGCCTG
CTGAGCTATC TCACCGAACA TAGTCGCCTA CTCGATATCA GTTGTGGGCC AGGCGGTATC
AGCCGCTATC TGGTTGCGAA GGAACCTAAA TTAACGGTTT TTGGTATCGA CCTCGCCCCG
CAAATGATCT CGCTCGCGAA ACAAAATGTC CCCTCGGGTC ACTTTGAGCT CATGGACTGC
CGTCATCTTC ATAAGCTTAT TGACCGAAAC ATGCCGCCGT TTGATCTTAT CGCCTGCGGC
TTTGCACTGC CTTACTTATC CCAAACGGAT CTGGTCGCGT TTTTTGCACA TCTTCGCGCC
CTGATTGCGC CGCAGGGCAT TGTGTATCTT AGCACCATGG AAGGTGAAGA TAGCCGTTCT
GGTTTACAAA CTGGTAGCAC TGGCGACAGT GTCTATGTGC ATTACCATCA ATATGATTTT
ATTGAACAAC AACTTGCGGC CAATGGTTTT CAGATACGAG ATGTCAAGCG TCAGCTCTTT
CCAGCATCTG AAGGAACAAC GGATCTCTTT ATTCTGGCGC AAGCGGGTGC TTAG
|
|---|
| Protein sequence | MKSQVKDNYQ ITVATFDKHA KQYQDKYLEF APYTQSYDCL LSYLTEHSRL LDISCGPGGI
SRYLVAKEPK LTVFGIDLAP QMISLAKQNV PSGHFELMDC RHLHKLIDRN MPPFDLIACG
FALPYLSQTD LVAFFAHLRA LIAPQGIVYL STMEGEDSRS GLQTGSTGDS VYVHYHQYDF
IEQQLAANGF QIRDVKRQLF PASEGTTDLF ILAQAGA
|
|---|
| |