| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2227 |
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| Symbol | |
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| ID | 4478623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2676883 |
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| End bp | 2677911 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726822 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_869862 |
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| Protein GI | 117920670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTC CTGCTGCCAC TAAAGAGCTC GATTCAGCGG CGCAAATTTT GCGTTTGGCC
GTGCCACAAA TGTCGGCGCT CGATATTCCG GTCACCCCAG AGAATTACAC GGTTTGGTAT
GAGTATTTTG CCCAGACGAA TCTCGATTTA AATCGCGCTA TCGATGGCTT TCTGGCGAAT
AAAGTGGTGT TCACTAAGGA GGTGAATACC AGTCTGTACA AGAATTTTAT TCAAGAGAAA
TCCCCCGAAG TCATCGAGAA CGTTCAAATC GAAACTCAAA TATTGATCAA CTCGCTGATC
AGTAAAATCA CTCAGTTAAA TCAGGGAACG GAGGCATTTT CAAGCACTCT GGCGGACTTT
GGCCTACAGC TTCAGACTAA GCCGGATGTG TGCACGCTCA ATCAGTTAGT GGATGGGGTG
ATTGATGAAA TGCAAAGTTT ACTCGTCAAT AACCAAACCA TGGAGCAGAG CCTGAGCGCC
ATGGGGCAAG AGGTACAAAA CTTAAAGACC GAAATGGAAA ATTTAAGTTT GGCGGCGATG
ACGGACCAAT TAACCTCATT ACATAACCGC CGCGCCTACG AAATTGCGAT TCAAGATCAT
ATCCACCGCG CCGAGCAGCA ACATACCCGT TGCAGCTTAT TACTCATTGA TATTGACCGC
TTTAAAGTGT TTAACGACAA CTATGGCCAT CAAGTGGGGG ATAAGGTGTT AGCCTATGTG
GCGCTCGCCC TCAAACAATG TGTGCGGGGG GATGACTTTG TCGCCCGCTA TGGCGGCGAA
GAATTTGTGG TGCTGTTGCC CAATACCCAT TTCCACGATG CGTTGCAAGT GGCCGAAACC
CTAAGGGAGC GGATTTCTGA GCGGCGCTTA GCCATAGGTA AAGATAAAAA ACTCTCCTTG
GGCGCCATCA CTGTGTCTAT CGGTTTAGCG TCTTTGCAGG AAGGTGATGA TGCCGATACC
TTGTTTAGCC GAGCGGATAA AGCCCTGTAT GAAGCCAAAT CCGATGGGCG CAATTGTGTC
CGTGGTTGA
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| Protein sequence | MSSPAATKEL DSAAQILRLA VPQMSALDIP VTPENYTVWY EYFAQTNLDL NRAIDGFLAN
KVVFTKEVNT SLYKNFIQEK SPEVIENVQI ETQILINSLI SKITQLNQGT EAFSSTLADF
GLQLQTKPDV CTLNQLVDGV IDEMQSLLVN NQTMEQSLSA MGQEVQNLKT EMENLSLAAM
TDQLTSLHNR RAYEIAIQDH IHRAEQQHTR CSLLLIDIDR FKVFNDNYGH QVGDKVLAYV
ALALKQCVRG DDFVARYGGE EFVVLLPNTH FHDALQVAET LRERISERRL AIGKDKKLSL
GAITVSIGLA SLQEGDDADT LFSRADKALY EAKSDGRNCV RG
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