Gene Shewana3_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2172 
Symbol 
ID4478376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2605396 
End bp2606022 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID639726768 
Productelectron transport complex protein RnfG 
Protein accessionYP_869808 
Protein GI117920616 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID[TIGR01947] electron transport complex, RnfABCDGE type, G subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.179108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA ATGGTCTGTT ACTTGCGCTA TTTGCCCTGC TCTGCACGGG CTTAGTCGCA 
GTGGTCAATC AACAGACCTT AGACAAAATT AAGCAGCAGG AGCAGCAGGA ATTGATGCGC
GTACTGCATC AGCTGATCCC TGATGAGCTC CATGACAATG AGCTAACCGC GCAATGCACC
CTGTTGCAGG ATAAAGAGGC GCTCGGCACC GAAGATGCCA TGCCCGCCTA TATTGCTACC
GCTGCTGGTA AACCCGTTGC TATCGCCCTA GAAGCCATTG CCCCCGATGG TTACAACGGC
AATATTAAGC TGATTGTGGG CATCAATACC CAAGGTGAAG TATTAGGCGT GCGCACACTC
GCCCACCAAG AAACCCCAGG CCTTGGGGAT AAAATCGATT TACGTAAATC CGACTGGGTG
ACGCAATTCG TCGGTAAAGT GCTTAAATCA GAAGATGATA AGCAATGGCT AGTGCAAAAA
GACGGTGGTG ATTTCGACCA ATTTACCGGC GCGACAATCA CACCACGCGC CTATGTGAAA
GCGGTTAAGC GCGCCGTATG GTACTTTACT CAGCATCAAG CAGAGATTTT CAGCCAACCT
CTGAATTGTG AGGCCAACCA TGACTAA
 
Protein sequence
MIKNGLLLAL FALLCTGLVA VVNQQTLDKI KQQEQQELMR VLHQLIPDEL HDNELTAQCT 
LLQDKEALGT EDAMPAYIAT AAGKPVAIAL EAIAPDGYNG NIKLIVGINT QGEVLGVRTL
AHQETPGLGD KIDLRKSDWV TQFVGKVLKS EDDKQWLVQK DGGDFDQFTG ATITPRAYVK
AVKRAVWYFT QHQAEIFSQP LNCEANHD