Gene Shewana3_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2035 
Symbol 
ID4476400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2435122 
End bp2436213 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID639726618 
Productmetallo-beta-lactamase superfamily hydrolase 
Protein accessionYP_869672 
Protein GI117920480 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.923739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0106214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACG AAGTAGATTT TTTAGGTGTA GGCAGCGAGT CTAAAAGTGG CGATGCTATT 
GCCATCCGTT TTGGCAATTT GCATGGCCGC CGGGACGAAC AAACAGTGGT GGTGATTGAT
GGTGGATTTA GTGATACCGG TTCTGAATTG GTAGAACACA TCCGCATACA CTTTGGGACT
GACATCGTTG ATTTGGTTAT TAGTTCTCAT CCAGATCAAG ACCACATTAA TGGTCTTGAA
GCGTTATTAA ATGAGCTGGA TGTCAAAGAG CTGTGGTTGC ACCAACCATG GCTACACAAC
CAGAACTTAG CTGATGAATT TGCTGATGGC CGTTTAACTG ACTCAAGTCT GGGTGAGCGT
TTAAAGCAAA ACTTAGAGCG TGCCTGGTCA CTGGCAAAAT TGGCGAACCG CAAAGGTATT
TTGATAAAAG AGCCATTCAC TGGGCTTACC GATAAATCAG GTTCGGTCAA AGTTTTGGGA
CCCAGCCAGT CTTATTACGA ATCATTAATC CCCGATTTTG ATGGAATGCC AAAACGTGCT
GAAGCAAGTA CTGTCGCCAA CGAGAGCTGG TTTGATAAAG CTGTACGTAA TGTAAAAACA
TTTCTTGCAA ACTGGGGAGA GGATCATATT TCAGATGATG GCCAAACTTC AGCAAAAAAT
AATTCGAGCG TAATTACCCA GTTTATCGTA GATGGAAGGC GTCTAGTCTT TACTGCGGAT
GCGGGGATTC AGGCATTAGA GCATGCCGCC GAACAAATTG AGTCATGTTA CTCTGGCGCT
GAGTTGAAGT TTATACAAAT CCCACACCAT GGAAGTAAAC GTAATATCGG GCCAACAGTA
TTAAACCGTT TGATTGGTAG TCCTGTGGTG CACAGCTCTG CACGCGATAT AACGGCAATT
GCATCAACCG CTAAAGCGGG GGAGCCGAAG CATCCAAGGA AGGCTGTGTT AAATGCATTC
ACCCATCGCG GTGCCAGAGT ATTGGTTACT CGTGGGCAAG GGATACTACA TTATCATAAT
TCACCTGGGC GTTCAGGATG GTCTTCATTA AATGCTGAGC CATATCACTT CTCTTATGAA
GAGGAAGTGT AA
 
Protein sequence
MGYEVDFLGV GSESKSGDAI AIRFGNLHGR RDEQTVVVID GGFSDTGSEL VEHIRIHFGT 
DIVDLVISSH PDQDHINGLE ALLNELDVKE LWLHQPWLHN QNLADEFADG RLTDSSLGER
LKQNLERAWS LAKLANRKGI LIKEPFTGLT DKSGSVKVLG PSQSYYESLI PDFDGMPKRA
EASTVANESW FDKAVRNVKT FLANWGEDHI SDDGQTSAKN NSSVITQFIV DGRRLVFTAD
AGIQALEHAA EQIESCYSGA ELKFIQIPHH GSKRNIGPTV LNRLIGSPVV HSSARDITAI
ASTAKAGEPK HPRKAVLNAF THRGARVLVT RGQGILHYHN SPGRSGWSSL NAEPYHFSYE
EEV