Gene Shewana3_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2021 
Symbol 
ID4476386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2416165 
End bp2417028 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content37% 
IMG OID639726604 
Productmetal dependent phosphohydrolase 
Protein accessionYP_869658 
Protein GI117920466 
COG category[R] General function prediction only 
COG ID[COG3481] Predicted HD-superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000315761 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000241246 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAAGC CAATATTCGT GTGGATGAAA AGCATTAAGT TTAGTGCAAA TCTCCCTACT 
GCAAATTGTG AGTTTATTGC ATCTAATAAC CTAGTTAGTG CAATAACATC AGCAGATATA
GCAAGAAATT GTAAAGTAGC TTATGGCCTT GCACAAATAA TTGCATCTCA TGACTATCAT
GGCAATACTG TTGTTTGCAC AATAAAAGCC ATACCAACCA GATGTTCTGA ACAGCAATAT
AGTCAAATGA TCGGTCTAGT TAACGAGCTC AAAGAAAGTT TAGTTGGCCG ATTTCTTAGA
CTGCTTAGTT TTGTGACGAT TGATGAACTT CAACCCTTTA CCGATTTTAT TCTGAATAAA
GAGGATATCC TTAAATTATT CATGAGCTCA GAAGCCAGCT TTAAGCATCA TCATTGTTAT
AAGGGAGGCT TGTTTGAACA CAGTATTGAA GTAGCAGAAA TGACTTATCA GAATGCAAAA
CACTTAGGTC ACTCAGATGT TGAATGTCAG ATAGGGCTTA TTGCTGCACT ATTTCATGAT
ATTGGTAAAA TTTATCCGGC TTTAAACATG AAAAATAATA AATACTGTGC AGGGCCACAT
GAGAGTTATG CCTTTGCTCT TTTGGCTAAA CCTTTAGGCG AGCTCGGTAC GTTAAACAGC
CGCGTCTTTT CAATGTTAAG CGATCTTCTA GCAATAAAAC CATATGGACA TAAGGCTCGA
TATGCTATAG AACATGTATT AAAGCAAGCA GACCGTACGT CAGCTGAATC TAATTTTGCT
AAAACCCAAT TCAAAACACT TCCGTCCCAC TACTATTTTA CTAAAGTAGA TGGGAGCGTA
ATTTATAGGC TGAATAGCTT ATGA
 
Protein sequence
MSKPIFVWMK SIKFSANLPT ANCEFIASNN LVSAITSADI ARNCKVAYGL AQIIASHDYH 
GNTVVCTIKA IPTRCSEQQY SQMIGLVNEL KESLVGRFLR LLSFVTIDEL QPFTDFILNK
EDILKLFMSS EASFKHHHCY KGGLFEHSIE VAEMTYQNAK HLGHSDVECQ IGLIAALFHD
IGKIYPALNM KNNKYCAGPH ESYAFALLAK PLGELGTLNS RVFSMLSDLL AIKPYGHKAR
YAIEHVLKQA DRTSAESNFA KTQFKTLPSH YYFTKVDGSV IYRLNSL