Gene Shewana3_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1932 
Symbol 
ID4479729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2297754 
End bp2298578 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content47% 
IMG OID639726514 
Producthypothetical protein 
Protein accessionYP_869569 
Protein GI117920377 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.482923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCA GTCAGCGATT ACAGCAGATC AATCGAATGG TGGGCTCTGG ATACGATCAT 
ATTTGGGACT GCTGCTGCGA TCATGGTTTA CTCGGCATGC TGCTACTGCA AAGAAATGCT
GCACCTAAGG TGCATTTTGT CGATTGTGTT GCGCCCTTGA TGCAGCAACT TAGCCTTGAG
TTAGCAAGGT TTTTCCCCCT GCCGTCTATC TCTAACACTC AAAACGCTGA GCAACAGGCC
AATACCCAGA GTGAATGGCA AGTGCATTGC CTCGATGTGG CGGCCTTGCC ACTGGCGCAA
TACGGCAAAC AAGCCAAGCA CTTAGTGATT ATTGCGGGTG TGGGCGGTGA GTTATTGGTT
GAATTGGTGC GCAGTATTGT GGCGAATAAG CAAACTCAAT GTGATGCTCA GAGTGGAAAT
AATTCGGGCA ATCATGACCT TAGTCAAAGC ACCTGCCAGC TCGAATTTAT TTTGTGTCCC
GTGCATCATA ATTACCATGT GCGCAGCGCG TTGGCGGAAT TGGGCTTATC CCTTAAAGAT
GAATATTTAC TCGAAGAAAA CCAACGTTTC TACGAGATCC TGCATTTAAC TCAGGCCAAT
GCCTGCTCAA AAACGAATAC CAGTTCTAAA ACAACTGAAA CTATGCCCTT AAGTGCGACG
GGTTCAATCA TGTGGCAAGG GTTAGATGCG GATAAAACCA ACCAAGCTAA GCGTTATCTT
GACCAAACCA TAGGTCATTA TCAGCGTATT CCTGAGCATC GCATGCCCAA CAAGTCGCAA
ATTGTGGCGG CCTATCAGCA CATTTTGCAG CAACTGAATT GTTAA
 
Protein sequence
MKISQRLQQI NRMVGSGYDH IWDCCCDHGL LGMLLLQRNA APKVHFVDCV APLMQQLSLE 
LARFFPLPSI SNTQNAEQQA NTQSEWQVHC LDVAALPLAQ YGKQAKHLVI IAGVGGELLV
ELVRSIVANK QTQCDAQSGN NSGNHDLSQS TCQLEFILCP VHHNYHVRSA LAELGLSLKD
EYLLEENQRF YEILHLTQAN ACSKTNTSSK TTETMPLSAT GSIMWQGLDA DKTNQAKRYL
DQTIGHYQRI PEHRMPNKSQ IVAAYQHILQ QLNC