Gene Shewana3_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1876 
Symbol 
ID4478184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2222692 
End bp2224542 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content51% 
IMG OID639726458 
Producthypothetical protein 
Protein accessionYP_869513 
Protein GI117920321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TCAGATTTGA GTTTACCTGC TCGCGTCAGG TGCCTTTGTA TGCGCATTTA 
TGTAATCAAT ACCTAAATTA CGATGCACTC AATATCAGCA TCGGCTGCGA CAGTCAGCAG
GATTTTGGTT CGCACACTTA TTTTATTGAG GCCCAAGGCG AACAAGCACA GCTAGAACAA
TTAGCCGAGG CGATCGCCGC CGACTTTTTA ATTTCAGTCT GGCTGGTCGA CTCAGGCATT
CATGCGATTG AGGCGCCGCA GGGACAACGG ACATTATTGA CCGTCCCATC CACTGAGGGT
GCGCTTAACG TGCAATCGGT CGCGGCTTTT TGCCAGCAGT GTTATCCCAG ATTTGGTGAT
AATCAGGCGG CGCAATTTGG TCAGCTCGAT TTAGCCTGCA CTTGCTGCCA CGGTGAAAAG
CGCTTAACCA GCGCCCAAAA GGCGTTAACG CTGTCCGATC TCAAGGCGAT GGCCGCGCAG
CTTATCAGCC AAGGCTCACT AGATTTAGCC AGCGAAGGCG TGCAATTAAG CCTAACGCCC
TTTGCCCATA CAACAGCGTC CAGACCGCAA CTGCTTATTT GTAATCCCAA TACCCTCAAC
GCGCATTTTT GCCTGAAGGA TAATCAAGTC CTCGCCCTAT CCAGTATCGA AAAACCGCTG
ATTAGTGTCA GACCAACCCA AGATAATCAA AAGCTGCCCG CACCACTCTA CGATATCTGC
TTTGGTTACA GCCGAGTGGT GTTAGTGCTG AGTGAAATCC TGCGGCAAAA AGGTATCGAT
TGGGTGTATC TTGAGGGGGC GCACCAGAGG CCAGCGCTCG CCTGGGTCGA TGGCGCTTGG
GCTCAGTTAG GCAGCCACAC AGCCGAAAAC GCAGCGACGC AGACCATTAA GCAATTCAGT
GCGCCGGAGC CTCTGCGGGA AGACATCCAC TTTTTAGGCT TTAAGGCCAA ATGGCAAGCC
AATAAGAAAA CCCGTTCACA CCAAGGTTTA TTGACTGTGC AGGCCATACC AAGTGAGGCC
GAGACAGCTG AATATGCCGC GAGTGAGGAA GACCATACCA TAGCGGATGC AGCCCTGTTT
GCAGCGCTGC TTAATGGTAA ATTTACGACC CATAAGCAGG CTAAAAATGC GGCGGTGATT
TACTTAAGCC ATCACCACAC TGGGCAAATC GTTACCTGCG ACAATAAGGG AGACACCTCA
CTGTTTTTCG CCCTGCCCGA ACTACCGGAC AATGGTTACG AGATTTTCCA TTGCCTTGAC
AGCAGTCCAC AAAAAGCCGT CGCGCAAAAA TTTAAGAGCT TGTTTCCAGA AGATTACTTA
AAGTTGCTGA GCCTAAAACT TAACGGCAGA CGTGATAATC TTCAGAGTCT GTGGGCGATT
GCTGCGGTAT TGATTGGCCT TAATCCACAG GAAGAAACCC AATCGCAAGC CTATTTGAGC
GATGCACTGC TCGCCGCCGC CATGCGTTAC CATGGTGCGA ATGCGCCGCG CATCGATTAT
CCCCTCACCA AAGGCGAGGC CCACCGCAGC CTGAATTGGT GTAAAACCCT AGGCACTCTG
CTGAGTTTTC GCGTTGCAGG GCACAGCGAT CCGAGTCAAC TGGCCTTTGC AATGCAGGAC
TCCCTCGCCG ACTACCTCGC GAATTGGCTG GAACACATTG ACTTAAATAT CGGTGTACAC
AACATTGCGT TAGCGGGCAA TGAGTTAGCC AATGAAACCC TCTGCAAGCG TATTAGCCTA
CGACTCGGGA AAAACTTCCC GCTATTGGTC AATCGCAGTC TGGATTTAGA GGGCGACAAC
CTGGCCGTAG GCGCGCTCTA TGTGAAGCAG CGGCAGTTAA ATAGCCTTTA A
 
Protein sequence
MKHIRFEFTC SRQVPLYAHL CNQYLNYDAL NISIGCDSQQ DFGSHTYFIE AQGEQAQLEQ 
LAEAIAADFL ISVWLVDSGI HAIEAPQGQR TLLTVPSTEG ALNVQSVAAF CQQCYPRFGD
NQAAQFGQLD LACTCCHGEK RLTSAQKALT LSDLKAMAAQ LISQGSLDLA SEGVQLSLTP
FAHTTASRPQ LLICNPNTLN AHFCLKDNQV LALSSIEKPL ISVRPTQDNQ KLPAPLYDIC
FGYSRVVLVL SEILRQKGID WVYLEGAHQR PALAWVDGAW AQLGSHTAEN AATQTIKQFS
APEPLREDIH FLGFKAKWQA NKKTRSHQGL LTVQAIPSEA ETAEYAASEE DHTIADAALF
AALLNGKFTT HKQAKNAAVI YLSHHHTGQI VTCDNKGDTS LFFALPELPD NGYEIFHCLD
SSPQKAVAQK FKSLFPEDYL KLLSLKLNGR RDNLQSLWAI AAVLIGLNPQ EETQSQAYLS
DALLAAAMRY HGANAPRIDY PLTKGEAHRS LNWCKTLGTL LSFRVAGHSD PSQLAFAMQD
SLADYLANWL EHIDLNIGVH NIALAGNELA NETLCKRISL RLGKNFPLLV NRSLDLEGDN
LAVGALYVKQ RQLNSL