Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1876 |
Symbol | |
ID | 4478184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2222692 |
End bp | 2224542 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726458 |
Product | hypothetical protein |
Protein accession | YP_869513 |
Protein GI | 117920321 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TCAGATTTGA GTTTACCTGC TCGCGTCAGG TGCCTTTGTA TGCGCATTTA TGTAATCAAT ACCTAAATTA CGATGCACTC AATATCAGCA TCGGCTGCGA CAGTCAGCAG GATTTTGGTT CGCACACTTA TTTTATTGAG GCCCAAGGCG AACAAGCACA GCTAGAACAA TTAGCCGAGG CGATCGCCGC CGACTTTTTA ATTTCAGTCT GGCTGGTCGA CTCAGGCATT CATGCGATTG AGGCGCCGCA GGGACAACGG ACATTATTGA CCGTCCCATC CACTGAGGGT GCGCTTAACG TGCAATCGGT CGCGGCTTTT TGCCAGCAGT GTTATCCCAG ATTTGGTGAT AATCAGGCGG CGCAATTTGG TCAGCTCGAT TTAGCCTGCA CTTGCTGCCA CGGTGAAAAG CGCTTAACCA GCGCCCAAAA GGCGTTAACG CTGTCCGATC TCAAGGCGAT GGCCGCGCAG CTTATCAGCC AAGGCTCACT AGATTTAGCC AGCGAAGGCG TGCAATTAAG CCTAACGCCC TTTGCCCATA CAACAGCGTC CAGACCGCAA CTGCTTATTT GTAATCCCAA TACCCTCAAC GCGCATTTTT GCCTGAAGGA TAATCAAGTC CTCGCCCTAT CCAGTATCGA AAAACCGCTG ATTAGTGTCA GACCAACCCA AGATAATCAA AAGCTGCCCG CACCACTCTA CGATATCTGC TTTGGTTACA GCCGAGTGGT GTTAGTGCTG AGTGAAATCC TGCGGCAAAA AGGTATCGAT TGGGTGTATC TTGAGGGGGC GCACCAGAGG CCAGCGCTCG CCTGGGTCGA TGGCGCTTGG GCTCAGTTAG GCAGCCACAC AGCCGAAAAC GCAGCGACGC AGACCATTAA GCAATTCAGT GCGCCGGAGC CTCTGCGGGA AGACATCCAC TTTTTAGGCT TTAAGGCCAA ATGGCAAGCC AATAAGAAAA CCCGTTCACA CCAAGGTTTA TTGACTGTGC AGGCCATACC AAGTGAGGCC GAGACAGCTG AATATGCCGC GAGTGAGGAA GACCATACCA TAGCGGATGC AGCCCTGTTT GCAGCGCTGC TTAATGGTAA ATTTACGACC CATAAGCAGG CTAAAAATGC GGCGGTGATT TACTTAAGCC ATCACCACAC TGGGCAAATC GTTACCTGCG ACAATAAGGG AGACACCTCA CTGTTTTTCG CCCTGCCCGA ACTACCGGAC AATGGTTACG AGATTTTCCA TTGCCTTGAC AGCAGTCCAC AAAAAGCCGT CGCGCAAAAA TTTAAGAGCT TGTTTCCAGA AGATTACTTA AAGTTGCTGA GCCTAAAACT TAACGGCAGA CGTGATAATC TTCAGAGTCT GTGGGCGATT GCTGCGGTAT TGATTGGCCT TAATCCACAG GAAGAAACCC AATCGCAAGC CTATTTGAGC GATGCACTGC TCGCCGCCGC CATGCGTTAC CATGGTGCGA ATGCGCCGCG CATCGATTAT CCCCTCACCA AAGGCGAGGC CCACCGCAGC CTGAATTGGT GTAAAACCCT AGGCACTCTG CTGAGTTTTC GCGTTGCAGG GCACAGCGAT CCGAGTCAAC TGGCCTTTGC AATGCAGGAC TCCCTCGCCG ACTACCTCGC GAATTGGCTG GAACACATTG ACTTAAATAT CGGTGTACAC AACATTGCGT TAGCGGGCAA TGAGTTAGCC AATGAAACCC TCTGCAAGCG TATTAGCCTA CGACTCGGGA AAAACTTCCC GCTATTGGTC AATCGCAGTC TGGATTTAGA GGGCGACAAC CTGGCCGTAG GCGCGCTCTA TGTGAAGCAG CGGCAGTTAA ATAGCCTTTA A
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Protein sequence | MKHIRFEFTC SRQVPLYAHL CNQYLNYDAL NISIGCDSQQ DFGSHTYFIE AQGEQAQLEQ LAEAIAADFL ISVWLVDSGI HAIEAPQGQR TLLTVPSTEG ALNVQSVAAF CQQCYPRFGD NQAAQFGQLD LACTCCHGEK RLTSAQKALT LSDLKAMAAQ LISQGSLDLA SEGVQLSLTP FAHTTASRPQ LLICNPNTLN AHFCLKDNQV LALSSIEKPL ISVRPTQDNQ KLPAPLYDIC FGYSRVVLVL SEILRQKGID WVYLEGAHQR PALAWVDGAW AQLGSHTAEN AATQTIKQFS APEPLREDIH FLGFKAKWQA NKKTRSHQGL LTVQAIPSEA ETAEYAASEE DHTIADAALF AALLNGKFTT HKQAKNAAVI YLSHHHTGQI VTCDNKGDTS LFFALPELPD NGYEIFHCLD SSPQKAVAQK FKSLFPEDYL KLLSLKLNGR RDNLQSLWAI AAVLIGLNPQ EETQSQAYLS DALLAAAMRY HGANAPRIDY PLTKGEAHRS LNWCKTLGTL LSFRVAGHSD PSQLAFAMQD SLADYLANWL EHIDLNIGVH NIALAGNELA NETLCKRISL RLGKNFPLLV NRSLDLEGDN LAVGALYVKQ RQLNSL
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