| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1852 |
|---|
| Symbol | |
|---|
| ID | 4477911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2193548 |
|---|
| End bp | 2194753 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639726434 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_869489 |
|---|
| Protein GI | 117920297 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.506177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG TGCCAACTAG CCAAGCCCCA ACGAGCCCAG CACCGGCGAG CAATGTGCCT
GTGACAAAGA TTCCGAGCGC CAATTGCGCC AGTAATACTC TCGACAACAA TACTCTCGAT
AACGTAAACA TCGAGCCAAC AACTCTGGCC GCACGTCTTG CGCGGCCAGA ACTGCTCGAG
TTAACGCCCT ACCAAAGTGC TCGCAGACTG GGTGGTCGAG GGGATATTTG GATCAACGCT
AACGAATCGC CCTTCAATAA TGTGGCGGTT GCCGAACTCG ATTTATCTAA GTTAAATCGT
TACCCCGAGT GCCAACCGCC CGCGTTGATC AATGCCTACA GCCAATATAG TGGTGTAGTG
GAGAGTAAAA TTGTCGCCAG TCGCGGTGCC GATGAGGCCA TCGAACTGCT GATCCGTGCC
TTTTGTGTCC CTGGCATCGA TTCCATTGCG ACCTTTGGGC CCACTTACGG CATGTACGCC
ATTAGCGCGC AAACCTTTAA TGTGGGCGTT AAGGCATTAA GCTTAACGGC TGAGTACGGT
CTCCCTGCCG ACTTTGCGAC GGCTGCACGC GGCGCTAAAT TAGTTTTTAT CTGCAATCCT
AATAACCCAA CCGGCACTGT GATTGACAAG GCGCGCATAG AGCAAGCCAT CCAAGCCCTG
CCCGACGCCA TTGTTGTCGT CGATGAGGCT TATATCGAGT TTTGCCCAGA ATATAGCGTC
GCCGATTTAC TCGAGTCTTA CCCAAACCTT GTGGTGCTGC GCACCCTTTC AAAGGCCTTT
GCCTTAGCAG GCGCCCGCTG CGGCTTTTTG CTCGCCAATG AAGAGATTAT CGAAATCATC
ATGCGGGTCA TTGCGCCCTA TCCCGTGCCA TTGCCCGTGA GTGAAGTGGC CGTGCAAGCG
CTATCAGCAG CAGGAATTGC GCGGATGAAA ACCCAAGTCA AAGAGCTCAA TGCGCAGGGC
GAGCGACTCG CGGCGGCGCT GAATTTGTAC TGCGAGCAAT GGGGCGGCGC CGTGCTAACA
CCCAATGGCA ACTATGTGCT CGCCGAATTT GACGACGTGG CCAAAGTGGC ACAGCTGCTT
ATCGATAATG GCATTGTCGC GCGGGCCTAT AAGGACCCAA GGCTGGCTAA AGCCATTCGT
TTTAGCTTTA GCTCTCAGGC TGATACCGAC CGCTTAGTGT CGCTATTTGA ATCGCAAAAG
CTATGA
|
|---|
| Protein sequence | MSQVPTSQAP TSPAPASNVP VTKIPSANCA SNTLDNNTLD NVNIEPTTLA ARLARPELLE
LTPYQSARRL GGRGDIWINA NESPFNNVAV AELDLSKLNR YPECQPPALI NAYSQYSGVV
ESKIVASRGA DEAIELLIRA FCVPGIDSIA TFGPTYGMYA ISAQTFNVGV KALSLTAEYG
LPADFATAAR GAKLVFICNP NNPTGTVIDK ARIEQAIQAL PDAIVVVDEA YIEFCPEYSV
ADLLESYPNL VVLRTLSKAF ALAGARCGFL LANEEIIEII MRVIAPYPVP LPVSEVAVQA
LSAAGIARMK TQVKELNAQG ERLAAALNLY CEQWGGAVLT PNGNYVLAEF DDVAKVAQLL
IDNGIVARAY KDPRLAKAIR FSFSSQADTD RLVSLFESQK L
|
|---|
| |