Gene Shewana3_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1839 
Symbol 
ID4477899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2181132 
End bp2181974 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID639726423 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_869478 
Protein GI117920286 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.841987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.233297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCA CTCTAACGAT TTTACTCCTC TGTTTTAGCC TATCGGCATC GGCCCTAGTG 
GTGCGCCACG ATGTGGATGC GCAAAAGTAC CTTGCTGATG CGAGCGATTT TCCACCCTTA
GCCACTTTTT ATACCGATGG CGCCCATGGC GTCTTAATCA AGCCAGATTG GATTGTGACT
GCGGCTCACG CCACTTTTTG CATCACCCCC GGGAGTGATA TTCGGATACT GGATACTGAC
CATAAGGTCG ACAGTGTATT TGTGCATAAG AAATATCAGC CAGGCATTAG CCATGACATT
GCATTAATCA AATTAGTCGA CCCCGTAACA GACGTGACGC CTGCTCGACT CTACGAGCAA
TCCGATGAAT TAGGCAAAAA CATCTGGTTT ATCGGGGCGG GTGGCACCGG AAATGGTTTA
ACGGGGCAAA CCGTGGATAA TGGCGCCAAT GCAGGAGTGC TGCGCAAAGC GCAAAATAGC
GTCGAATTTG CCCAAGGGCC ATTATTAACA TTTACATTCG ATTCGGGGGA TGAGGCGCTA
CCCTTGGAAG GGGTTTCTGG CGGCGGTGAT AGTGGTGGTC CAGCCTATCT CACGCTTGAG
GGCATACATT ACTTACTTGG GATCAGCTCC AGAGTGGGTG GAGGCGAAAT AGGCAAGTAT
GGCGTGGTGG AAGTGTATTC CAGAGTGTCT TTCTTTAGCG CTTGGATTGA GGATATCACC
AGTGGCGACG CAAAACTGCA GCAGCAATTC GCCCTGCCAA AACTGGATAA ACTGCCAGCA
GGAATGACGG CAGAAATGTT AGCCGAAGTC TGTGCTGATA TAGGGTTAAA ACCATCTCTT
TAA
 
Protein sequence
MRITLTILLL CFSLSASALV VRHDVDAQKY LADASDFPPL ATFYTDGAHG VLIKPDWIVT 
AAHATFCITP GSDIRILDTD HKVDSVFVHK KYQPGISHDI ALIKLVDPVT DVTPARLYEQ
SDELGKNIWF IGAGGTGNGL TGQTVDNGAN AGVLRKAQNS VEFAQGPLLT FTFDSGDEAL
PLEGVSGGGD SGGPAYLTLE GIHYLLGISS RVGGGEIGKY GVVEVYSRVS FFSAWIEDIT
SGDAKLQQQF ALPKLDKLPA GMTAEMLAEV CADIGLKPSL