Gene Shewana3_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1806 
Symbol 
ID4477495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2131190 
End bp2132206 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content41% 
IMG OID639726390 
Productvault protein inter-alpha-trypsin subunit 
Protein accessionYP_869445 
Protein GI117920253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.825295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.327255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA ATGTGATAAA TAACATAGCG CTAGGTAATT CTGAAGGATT TGGGTTTAAT 
CATGACATTG TTTTAAAGCA CAGTTTAGTT AATGCGCAAC TGAATGGAGC TATCAGTGAA
GTCGAATTGG TTCACGAATT TGTAAATCGT GAAACTTGCC CTATTGAAGC CATATTCTCA
TTTACGTTAC CACTAGATGC GGTCATTTTA GGGTTATCTA TGGCGATTGG TGAGCGTCAG
TTCACAGGTG AAGTGACGCC AAAAGCTATC GGAACTGATA AATACGAAGG TGCCATAGCA
GAAGGTGACA GTGCAGTATT ACTGGAGCGG TTGAATGATG GGCTATATTG TCTCAATGTT
GGTAATTTGC TACCTAATGA TGACGTTACC ATTTCTATTC AATATGCCCA AGTCCTGAAC
TGGCAAGACC GTAAACTGCG GTTTTATTTT CCGTGTACAA TTGGTGACCG CTACGGACAT
CAGCGATCAG CAAATTTACA TGATTATCAA CAGATTGAGC ATACACTAGA TAATGGCGCA
CGCTTAACAT TTAATCTGGC GATTAACGGT GAATTATCTT CCTCATTAGT TACCAGTCCA
AGTCATTCAT TAACGGTAAA ACGAGAAGAG AGTTCTTTAA TCTTATCAGG GGATAGGGTT
ATTCCTGATA GGGACATCAT AATTACACTA GAAGCATTAC CTTCATTTAC TGGCGAAATT
CTAGTTGAAA AGAGTGCTTT TGGGTTGCAG TACTGCGCCA ACCTGTTATT ACCATCCTCA
GATAGCCACA ATGAGTCAGC TCAGTGCTTC CAGTTTATTG TTGACCGTTC AGGTTCATGT
GCGGAGATGC CATTGAGCAG GTGCGTAAGG CCTTCGTCGC AATTAAAACA CTTCTCAAGC
CATCAGACTG GTTCAACATC ATCTCCTTTG GGTCTCAAGC ACAAAGTTTG TTTCCATCTC
CTGTTCCTGC CGATAGTGAG CATCTTGCAA AACTTCATGC ATACATCAAC CAGCTAG
 
Protein sequence
MNNNVINNIA LGNSEGFGFN HDIVLKHSLV NAQLNGAISE VELVHEFVNR ETCPIEAIFS 
FTLPLDAVIL GLSMAIGERQ FTGEVTPKAI GTDKYEGAIA EGDSAVLLER LNDGLYCLNV
GNLLPNDDVT ISIQYAQVLN WQDRKLRFYF PCTIGDRYGH QRSANLHDYQ QIEHTLDNGA
RLTFNLAING ELSSSLVTSP SHSLTVKREE SSLILSGDRV IPDRDIIITL EALPSFTGEI
LVEKSAFGLQ YCANLLLPSS DSHNESAQCF QFIVDRSGSC AEMPLSRCVR PSSQLKHFSS
HQTGSTSSPL GLKHKVCFHL LFLPIVSILQ NFMHTSTS