| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1805 |
|---|
| Symbol | |
|---|
| ID | 4477494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2130760 |
|---|
| End bp | 2131212 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639726389 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_869444 |
|---|
| Protein GI | 117920252 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.589257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.195549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAA AATATGGCAT CAGCGATCTG GCAAGATTGC TCGACTTTCC AGTTAGAACG
ATCAGGTTTT ATCTGCAAAA GGGGCTGATT AAAGGGCCTC ATGGCGCTGG TCGTGGAGCC
TGGCACGACA CAGAACATGT TGAGCAATTG CTAAAAATTA AACGTTGGCA AAGTGCGGGG
CTGTCTTTAG AGCGAATTCA AGAATTACTG AATTATGCAA ATGAACCTGA GTTGCCTGAT
ATGCAACCAA AAGCAGGGGA CATGCGTGTA ATTAGTCATT TGTATCTGGG CCAAGGGCTG
ACACTAATGA TTGACCCAGT TGCGGCAGGT GTGAGTAGTG AGCAGTTAAG GATGTTAGTT
CCTGCAATGG TAAGTAGCTA TCAGCAGGTT ATGCAGTGCT CTTTGCCTAA AAATAATGGT
GGGGTGGAAA ATGAACAACA ATGTGATAAA TAA
|
|---|
| Protein sequence | MQEKYGISDL ARLLDFPVRT IRFYLQKGLI KGPHGAGRGA WHDTEHVEQL LKIKRWQSAG
LSLERIQELL NYANEPELPD MQPKAGDMRV ISHLYLGQGL TLMIDPVAAG VSSEQLRMLV
PAMVSSYQQV MQCSLPKNNG GVENEQQCDK
|
|---|
| |