| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1721 |
|---|
| Symbol | |
|---|
| ID | 4479554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2023995 |
|---|
| End bp | 2025257 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639726304 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_869360 |
|---|
| Protein GI | 117920168 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.6453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.200178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GCTGTAAAGT TTCAGTTCAT CAATTACAGG TCGGCAATTT TGTGCGTTTG
CCCGTGGCTT GGAAAGATCA CCCTTTTTTA TTCAGTAGCT TTCACATCAA ACAAGCTGCG
CAGATTGAGC TCATTAAAAA TCTGGGCATC GAATTCGTGA TTGTCGATTT AGAGCGCAGT
GAAACCTCCC CCTTAAATCC AGATGCCGTT AATCCAATAA AATTGCCGCC GACGGCCGAG
ATCAATGTGT TAAAAAACGA CATGGATCAA TACAAGGCCG AGCAAATTGA AGTGCAAAAA
AAGCTGCGCC GCGATATCCA TAAAACCGAG CAAAACTTTA CCCGCTCAGT AGCTATGATG
CGCAGTCTTA TTGCTAAGCT TCGCAATCGC CCACTCAATG CAGTAGATGA TGCCAAGGAT
TTAGTCCATA CCATTGTCGA GCAATTGTTA ACCTCCGATA ACCTAGTACT GCATTTAATG
AGTGATGCCA AACAGGATGA GAGCATTTAC TACCACTCAT TAAACGTAGC CATTCTCTCT
ATGCTCATCG CCAAAGAGAT GGAATGGGAT CGCAGCGAAA TCGAATTAGT AGGCTTAAGT
GCGTTATTTC ACGATGTCGG CAAACTCAAA GTGCCGCCGC AAATTTTGAA AAAGACTACA
CCTTGGTCGG CGCCAGAGCT GAATTTTATC AAGCAACATC CGCTGCTGGG GATTGAACTG
CTTAAACTGG CCGATAACTT CCCTGAAGCC GCCTTGCCTC CTATTACCAA TCACCATGAG
TTTCTCGATG GTACGGGTTA TCCAAAAGGG TTAAAGGAAG CAGATCTGGA TAAAATCTCC
CAGTTGTTAG CCGTCGTAAA CGAGTACGAC TCGCTTTGTT ATCCGAGTAA TCAGGGTAAG
GCGCGTATGC CCTATGCCGC CTTGGGCTAT TTATATAAGC AGTACAAAAC CAAATTAAAT
CAGGAATATA TTGGTAAGAT GATCAAAATG CTCGGCATTT ATCCGCCAGG GAGCGTGGTG
GAGTTGTCGA GCGGTCAATA TGCCATGGTG ATGTCGGTCA ATCTGCAAAA ACTACTTTGC
CCGAAAATCC TTGTGTATGA TGCACTGGTG CCCAAAGATC AGGCGCCGAT TGTCGATCTT
GAAGTCGAAG GGATAACGAT AGTCCGCTGT CTGCCGCCCG CCGCACTGCC TGAAAAAGTA
CACGAGTACC TCAATCCTCG CGAGCGCGTG AGCTACTATT TTGGCGGCGA TAGTCGTAAA
TAA
|
|---|
| Protein sequence | MKKSCKVSVH QLQVGNFVRL PVAWKDHPFL FSSFHIKQAA QIELIKNLGI EFVIVDLERS
ETSPLNPDAV NPIKLPPTAE INVLKNDMDQ YKAEQIEVQK KLRRDIHKTE QNFTRSVAMM
RSLIAKLRNR PLNAVDDAKD LVHTIVEQLL TSDNLVLHLM SDAKQDESIY YHSLNVAILS
MLIAKEMEWD RSEIELVGLS ALFHDVGKLK VPPQILKKTT PWSAPELNFI KQHPLLGIEL
LKLADNFPEA ALPPITNHHE FLDGTGYPKG LKEADLDKIS QLLAVVNEYD SLCYPSNQGK
ARMPYAALGY LYKQYKTKLN QEYIGKMIKM LGIYPPGSVV ELSSGQYAMV MSVNLQKLLC
PKILVYDALV PKDQAPIVDL EVEGITIVRC LPPAALPEKV HEYLNPRERV SYYFGGDSRK
|
|---|
| |