Gene Shewana3_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1703 
Symbol 
ID4479536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2002885 
End bp2006148 
Gene Length3264 bp 
Protein Length1087 aa 
Translation table11 
GC content51% 
IMG OID639726286 
Productacriflavin resistance protein 
Protein accessionYP_869342 
Protein GI117920150 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCA TCAGCACCTC AGTTAAACGG CCAGTCACGG TATGGATGTT CATGCTGGCC 
ATTATGTTAT TCGGTATGGT GGGGTTTTCG CGCTTAGCGG TAAAACTCCT GCCCGATTTA
AGTTACCCCA CCTTAACCAT TCGGACCATG TACGATGGTG CGGCGCCCGT TGAAGTAGAA
CAACTGGTCT CAAAACCCAT TGAAGAAGCC GTCGGCGTGG TGAAAGGCTT GCGTAAGATA
AGCTCTATCT CCCGCTCTGG CATGTCCGAT GTAGTGCTCG AGTTTGAATG GGGCACCACT
ATGGATATGG CGAGCCTCGA TGTGCGTGAA AAACTCGACA CTATCGCACT ACCACTGGAT
GTTAAAAAGC CATTATTGCT TCGCTTTAAC CCCAACCTTG ACCCTATCAT GCGCTTAGCG
CTGTCGGTGC CTAATGCGTC TGAGGCTGAA CTCAAGCAGA TGCGTACCTA CGCCGAGGAA
GAACTTAAAC GCCGTTTAGA AGCCCTCTCT GGTGTGGCTG CGGTGCGCTT ATCCGGTGGC
TTAGAACAGG AAGTGCATAT TCAGCTCAAT CAGGAAAAGT TATCCCAGCT CAATTTGAAT
GCTGACGACA TTAAACGCCG CATCAACGAA GAAAACATCA ACTTATCTGC GGGTAAAGTG
ATCCAAGGCG ACCGCGAATA TCTGGTACGT ACCCTTAACC AATTCAATTC ATTGGAAGAA
TTGGGACAAG TGATCGTCTA TCGCGACGCA CAGACCTTAG TACGTCTATT CGAAGTCGCC
ACCATTACCG ATGCCTTTAA AGAGCGTAGC GACATCACCC GTATCGGCAG CCAAGAGTCG
ATTGAACTGG CTATCTATAA GGAAGGCGAT GCCAACACGG TCGCGGTGGC TAAAAAGCTG
CGCGATGAGC TAGTCAAAAT CAACCAAGAT CCGAAGCAAA ACAAACTGGA AGTGATTTAC
GATCAGTCCG AGTTTATTGA GAGTGCCGTT AGCGAAGTGA CCTCGTCCGC GTTGATGGGC
AGTATTTTGT CCATGCTGGT GATTTACCTG TTCCTGCGCA ATATTATCCC GACGCTGATT
ATCTCTATCT CGATCCCCTT CTCGGTGATT GCCACCTTTA ACATGATGTA CTTTGCCGAT
ATCAGCTTAA ACATCATGTC ATTAGGCGGT ATTGCGCTCG CCATTGGGCT CTTGGTTGAC
AACGCCATTG TGGTGCTGGA AAACATCGAC CGCTGCCGTA GTGAAGGCAT GAGCAAATTA
GATGCGGCAG TGACTGGAAC CAAAGAAGTG GCGGGCGCGA TTTTCGCCTC CACCCTAACC
ACACTCGCGG TGTTTGTCCC CTTGGTTTTT GTCGACGGTA TTGCCGGCGC CCTGTTCTCG
GATCAAGCCC TCACAGTGAC CTTTGCTCTG CTAGCATCAC TCTTGGTGGC ATTAACTTCG
ATTCCGATGC TAGCCTCCCG CGAAGGCTTT ACAGCACTGC CAGAACTCAT CAAGAAAACC
CCGAAGGAGA AACCCACTAC TAAGCTCGGT AAGTTAAAAC ACTACAGTGC GACGGTATTT
TCCTTCCCGA TTGTGTTGCT TTTTAGCTAC TTACCGAGTG CATTGCTGAC ATTAGCGTTA
GTCATTGGCC GCTTCTTCTC TTGGCTGCTT GGATTAGTGA TGCGCCCACT GAGCAGTGGT
TTTAACTTTG TTTACCACGC TATCGAGTCG GTTTATCACA AACTGCTGGC GATGGCGCTA
CGTAAACAAG TCGCCACCTT GTTACTGACC ATTGGGATCA CAGGTGCCTG TATTAGCCTG
CTGCCCCGTC TTGGTATGGA ACTCATCCCA CCGATGAACC AGGGGGAGTT TTATGTGGAG
ATCCTGCTGC CTCCTGGCAC TGCGGTCGGT GAAACCGATA AAGTGCTGCA ACAACTCGCG
ATGTCGATTA AAGACAGGCC CGAAGTCAAA CATGCCTATA GCCAAGCAGG CAGCGGCGGT
CTCATGACCT CTGATACCGC CCGTGGCGGC GAAAACTGGG GGCGTTTACA GGTCGTTCTG
AACGATCACA CGGCTTACCA CCAAGTAACG CAAGTGCTGC GAGACACCGC ACGCCGCATC
CCTGAACTGG AAGCCAAAAT CGAGCAACCT GAACTCTTCA GCTTTAAAAC CCCATTGGAG
ATTGAACTCA CAGGTTACGA TTTACACTTG CTCAAACGCA GTGCCGATAA TCTGGTTAAG
GCGCTTTCCG CCTCCGAGCG CTTTGCCGAT GTGAATACTA GCCTGCGTGA TGGTCAGCCA
GAACTTAGCA TTCGCTTCGA CCATGCTCGC TTAGCCGCCT TAGGCATGGA TGCGCCCACG
GTCGCCAATC GCATTGCCCA GCGCGTCGGT GGCACGGTCG CCAGTCAATA CACAGTACGT
GACCGCAAAA TTGATATTTT AGTGCGTAGC GAACTGAATG AGCGGGATCA AATCAGTGAT
ATCGATGCGC TAATCATCAA CCCCAACAGC CCACAACCGA TAGCCCTGAG CGCCGTGGCC
GAAGTGTCAT TGCAATTAGG TCCATCGGCA ATTAACCGCA TCAGCCAACA ACGCGTGGCC
TTAGTATCGG CCAACCTTGC CTATGGCGAC TTAAGTGACG CAGTGGCCGA AGCGCAGCAA
ATTTTGTCGG CACAAGTGTT GCCCGCCTCG GTTCAAGCAC GCTTTGGTGG GCAAAATGAA
GAAATGGAGC ATTCATTCCA ATCACTGAAG ATTGCATTAA TCCTAGCTGT TTTTCTGGTG
TACTTAGTGA TGGCGAGTCA GTTCGAATCG CTGCTGCATC CGCTGCTGAT CTTATTTGCA
GTGCCGATGG CGCTGGCAGG TAGCGTGCTG GGGCTCTATA TCACCCAAAC TCATTTGAGT
GTGGTGGTGT TTATCGGCCT CATCATGCTC GCGGGGATTG TGGTCAACAA CGCCATCGTA
CTCGTGGATA GGATTAATCA GCTGCGCACC GAAGGCGTGG ACAAGCTTGA GGCCATTAAG
GTCGCAGCCA AATCCCGTCT GCGCCCGATT ATGATGACCA CCTTAACCAC AACTTTAGGT
TTACTGCCGA TGGCCTTAGG TTTAGGCGAT GGCTCAGAAG TCCGCGCACC AATGGCGATT
ACCGTAATCT TTGGTCTGAG CCTCTCGACC CTATTGACCC TGATTGTGAT TCCAGTGCTC
TATGCCTTGT TTGACCGTAA AGAGTTTACG CATACCGCCA CAGAGCAAGA CAACACGGCA
GAAACCACGG AGGCTCGCCT ATGA
 
Protein sequence
MSIISTSVKR PVTVWMFMLA IMLFGMVGFS RLAVKLLPDL SYPTLTIRTM YDGAAPVEVE 
QLVSKPIEEA VGVVKGLRKI SSISRSGMSD VVLEFEWGTT MDMASLDVRE KLDTIALPLD
VKKPLLLRFN PNLDPIMRLA LSVPNASEAE LKQMRTYAEE ELKRRLEALS GVAAVRLSGG
LEQEVHIQLN QEKLSQLNLN ADDIKRRINE ENINLSAGKV IQGDREYLVR TLNQFNSLEE
LGQVIVYRDA QTLVRLFEVA TITDAFKERS DITRIGSQES IELAIYKEGD ANTVAVAKKL
RDELVKINQD PKQNKLEVIY DQSEFIESAV SEVTSSALMG SILSMLVIYL FLRNIIPTLI
ISISIPFSVI ATFNMMYFAD ISLNIMSLGG IALAIGLLVD NAIVVLENID RCRSEGMSKL
DAAVTGTKEV AGAIFASTLT TLAVFVPLVF VDGIAGALFS DQALTVTFAL LASLLVALTS
IPMLASREGF TALPELIKKT PKEKPTTKLG KLKHYSATVF SFPIVLLFSY LPSALLTLAL
VIGRFFSWLL GLVMRPLSSG FNFVYHAIES VYHKLLAMAL RKQVATLLLT IGITGACISL
LPRLGMELIP PMNQGEFYVE ILLPPGTAVG ETDKVLQQLA MSIKDRPEVK HAYSQAGSGG
LMTSDTARGG ENWGRLQVVL NDHTAYHQVT QVLRDTARRI PELEAKIEQP ELFSFKTPLE
IELTGYDLHL LKRSADNLVK ALSASERFAD VNTSLRDGQP ELSIRFDHAR LAALGMDAPT
VANRIAQRVG GTVASQYTVR DRKIDILVRS ELNERDQISD IDALIINPNS PQPIALSAVA
EVSLQLGPSA INRISQQRVA LVSANLAYGD LSDAVAEAQQ ILSAQVLPAS VQARFGGQNE
EMEHSFQSLK IALILAVFLV YLVMASQFES LLHPLLILFA VPMALAGSVL GLYITQTHLS
VVVFIGLIML AGIVVNNAIV LVDRINQLRT EGVDKLEAIK VAAKSRLRPI MMTTLTTTLG
LLPMALGLGD GSEVRAPMAI TVIFGLSLST LLTLIVIPVL YALFDRKEFT HTATEQDNTA
ETTEARL