Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1697 |
Symbol | |
ID | 4477207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1995135 |
End bp | 1995674 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639726280 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_869336 |
Protein GI | 117920144 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTA TGCATTTTGG ATTAGGCTCC CTGCTATTGT TAACTCTTGG CGTTCAGGCA GCAGAGCCAG TGCCAGCATC AGTGCCTGTG TCAGTGCCTG TGTCAGAGGC AAGGCCTAAA ACCGTGATTA CTGCTGAGCA AATCAGTATT GCCCGCAATG GCACTCAACT CCCAGTGACA GGGCTCGAAG ACTATTTTAC TGGCCCAGTG CGCGTTGAGC CTTTATTCCA AGCCAAGGGC GAAGGTCGCG CATCTGGCGC CTTAGTCACC TTTGAGCCGG GCAGTCGCAC CCATTGGCAT ACTCATCCAG TGGGGCAAAC CATAATCGTC ACCTCTGGAA TGGGCTGGGT GCAGCAAGAA GGTCAAACAC GCCTTGAAAT TCACCCTGGG GATGTGGTGC AGATCCCTGT GAATGTCAAA CATTGGCATG GCGCGACGAG CAACACACCC ATGACGCATA TCGCCATACA AGAAGCCAAC GCGGGTAAGG TGGTCACATG GCTAGAAAGT GTTTCCCCAG CTCAATACGA CAAGCCCTGA
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Protein sequence | MKPMHFGLGS LLLLTLGVQA AEPVPASVPV SVPVSEARPK TVITAEQISI ARNGTQLPVT GLEDYFTGPV RVEPLFQAKG EGRASGALVT FEPGSRTHWH THPVGQTIIV TSGMGWVQQE GQTRLEIHPG DVVQIPVNVK HWHGATSNTP MTHIAIQEAN AGKVVTWLES VSPAQYDKP
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