Gene Shewana3_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1697 
Symbol 
ID4477207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1995135 
End bp1995674 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID639726280 
Productcupin 2 domain-containing protein 
Protein accessionYP_869336 
Protein GI117920144 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA TGCATTTTGG ATTAGGCTCC CTGCTATTGT TAACTCTTGG CGTTCAGGCA 
GCAGAGCCAG TGCCAGCATC AGTGCCTGTG TCAGTGCCTG TGTCAGAGGC AAGGCCTAAA
ACCGTGATTA CTGCTGAGCA AATCAGTATT GCCCGCAATG GCACTCAACT CCCAGTGACA
GGGCTCGAAG ACTATTTTAC TGGCCCAGTG CGCGTTGAGC CTTTATTCCA AGCCAAGGGC
GAAGGTCGCG CATCTGGCGC CTTAGTCACC TTTGAGCCGG GCAGTCGCAC CCATTGGCAT
ACTCATCCAG TGGGGCAAAC CATAATCGTC ACCTCTGGAA TGGGCTGGGT GCAGCAAGAA
GGTCAAACAC GCCTTGAAAT TCACCCTGGG GATGTGGTGC AGATCCCTGT GAATGTCAAA
CATTGGCATG GCGCGACGAG CAACACACCC ATGACGCATA TCGCCATACA AGAAGCCAAC
GCGGGTAAGG TGGTCACATG GCTAGAAAGT GTTTCCCCAG CTCAATACGA CAAGCCCTGA
 
Protein sequence
MKPMHFGLGS LLLLTLGVQA AEPVPASVPV SVPVSEARPK TVITAEQISI ARNGTQLPVT 
GLEDYFTGPV RVEPLFQAKG EGRASGALVT FEPGSRTHWH THPVGQTIIV TSGMGWVQQE
GQTRLEIHPG DVVQIPVNVK HWHGATSNTP MTHIAIQEAN AGKVVTWLES VSPAQYDKP