Gene Shewana3_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1662 
Symbol 
ID4476117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1954074 
End bp1954829 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID639726245 
Producthypothetical protein 
Protein accessionYP_869301 
Protein GI117920109 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGT TACTGATCGC CCTCGCAGGC TTACTCGGCG GCATGTTAAA TGCGGTGGCG 
GGCGGCGGCA GCTTTATCAC CTTATTTGCC CTTGTGTTTG TGGGCGTGCC ACCACTCATG
GCCAACGCGA CGGGCACCGC CGCTCTGCTC CCCGGCTACC TTGCCAGTGC TTGGCGTTTT
CGAAAAGAGA TTGAATATCC AGCAAATCTT AACCTAAAAA CCCTGTGCCT GATTGCGATA
GCTGGCGGAT GCCTAGGCGC GGCGATACTG CTAAGTACCA GCGAGCAAGT ATTTGCTTAT
CTCGTCCCTT GGTTGATTTT GCTGGCCACA CTCGCCTTTA TCGCCGGACC TTGGTTACTG
AAAAAACGCT TAGCGAATGC CAGCATCCCC CGTGTGAATA CCGTCAAGCC ACTGACGGTA
ATGATGATTC TCTTTATCGT CTGTATTTAC GGCGGTTATT TTAACGGGGG ATTAGGGATT
ATTTTACTCG CCACCTTTGG GCTACTCGGC CAGACCCAAT TACATGGGAT GAACGGGCTT
AAAAATTTAC TCTCCGCCCT ACTCACCACC ATTGCCGTGG TGATTTACGC CCTAGGTAAT
CTGATTGACG GGCAATATCT GTTACTGCTT GCCATTATGG CGATTATTGG CGGCTATCTC
GGTGCCGCGC TGGCTTATCG CATTCCCCAA TCCCTGTTGC GGGGTTTTAT TGTGCTTGTC
GGTTTCGCCA TGAGTGTTGG ATTTTTTATG CGTTAA
 
Protein sequence
MDWLLIALAG LLGGMLNAVA GGGSFITLFA LVFVGVPPLM ANATGTAALL PGYLASAWRF 
RKEIEYPANL NLKTLCLIAI AGGCLGAAIL LSTSEQVFAY LVPWLILLAT LAFIAGPWLL
KKRLANASIP RVNTVKPLTV MMILFIVCIY GGYFNGGLGI ILLATFGLLG QTQLHGMNGL
KNLLSALLTT IAVVIYALGN LIDGQYLLLL AIMAIIGGYL GAALAYRIPQ SLLRGFIVLV
GFAMSVGFFM R