Gene Shewana3_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1594 
Symbol 
ID4476549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1870642 
End bp1871157 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID639726169 
Producthypothetical protein 
Protein accessionYP_869234 
Protein GI117920042 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.806942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG CGACCTTAGC ATTTAGCCGT TTCCATAAGC GCGCCTTAGT CTTAGTGGTG 
TTTACCGCCG CAGCACTGCT GATAAGCATC AACTGGCGAA TAGCCCAGTT TGAGCAGTTA
TTACAAGATG GCCAAGTGGT ACGTTTTGCC TTAGCGCCAG TGGATCCTCG CTCGATTATG
CAGGGGGATT ACATGGCCTT GGAGTATGCC ATTGCGCAGG AGGTGCGCGC CGCACTGCCT
GAAGGGATGA CGCAGGGGCA ACTGCTGTTG ACGCTCGACT CGCAAAAAGT GGCGCACTTT
GTTGGTATTT ACCGTGATCA ACCCAAAACG GCTGAGCAAC TCACGGTAGA TTTTCGTCTG
CGTAATCATA GAGTAAAGCT TGCCTCAAAT AGTTTCTTCT TCGAAGAGGG CCAAGCTGAC
CACTTCAGCC AAGCAAAGTA TGGCGAGTTT AGAGTTAGCG ATAAGGGAGA ATTGTTGTTA
GTCAGCCTAC TCGATGCGCA GTTGCAGCCG CTATAA
 
Protein sequence
MDKATLAFSR FHKRALVLVV FTAAALLISI NWRIAQFEQL LQDGQVVRFA LAPVDPRSIM 
QGDYMALEYA IAQEVRAALP EGMTQGQLLL TLDSQKVAHF VGIYRDQPKT AEQLTVDFRL
RNHRVKLASN SFFFEEGQAD HFSQAKYGEF RVSDKGELLL VSLLDAQLQP L