| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1540 |
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| Symbol | |
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| ID | 4477436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1797324 |
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| End bp | 1797986 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726110 |
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| Product | signal peptidase I |
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| Protein accession | YP_869180 |
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| Protein GI | 117919988 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0486911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAAAA GAATAAGAAC ATTACTTAGA GATAATCGCT CCATTTTATT GTTTATCAGC
CTAATGCTGG TGTTCAGGAG CGCGGTCGCC GATTGGAATA CAGTGCCGAC AGGTTCTATG
TTGCCGACGA TTGTCGAGGG CGATCGCATT CTGGTGAATA AGATGGCTTA CGATATCAGA
GTGCCATTTA CCCATATCCC ACTCGTTAAA CTTGCGGATC CAACACGTGG GGATATTATC
GTGTTCGACT CTAAAAAAGC CGATAAAAAG CTGATTAAGC GGGTGATCGC CGTACCCGGT
GATACAGTGG TGATGCGGGA TAATCGCTTG TATTTAAATG GCAAACCACT CGCATATACA
CAGCAAACAT TAAGTGCCTA TGCGCCGGAG AATGTCACCG AATGGCAGGA GGATCTACTC
GGCATAGCCC ACAGTATTCG ACTTAATCCG CAGCCCTCGC AGCTGGCTAA TTTTGGCCCA
GTTACGGTTC CTGATAACCA GTATTTGGCG CTAGGGGACA ATCGAGATAA CAGTGCCGAT
TCAAGAGTCA TAGGTTTTGT GCCCAGAGAG GAGATTGTTG GCCGCTCAAG CTCCGTAGTC
TTCTCATTGG ATTACAACGA TTATTACTTG CCGCGGCCAG AGCGTATGAT GCGCACGTTC
TAA
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| Protein sequence | MFKRIRTLLR DNRSILLFIS LMLVFRSAVA DWNTVPTGSM LPTIVEGDRI LVNKMAYDIR
VPFTHIPLVK LADPTRGDII VFDSKKADKK LIKRVIAVPG DTVVMRDNRL YLNGKPLAYT
QQTLSAYAPE NVTEWQEDLL GIAHSIRLNP QPSQLANFGP VTVPDNQYLA LGDNRDNSAD
SRVIGFVPRE EIVGRSSSVV FSLDYNDYYL PRPERMMRTF
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