| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1414 |
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| Symbol | |
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| ID | 4479011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1638728 |
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| End bp | 1640125 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725969 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_869054 |
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| Protein GI | 117919862 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.70486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTG CGACCCTCTT TACTGCCCTA CTCGTCTGTA TGTTTTTAGG TATGCCTATC
GCGATTGCGT TAGGTTTCTC GAGCATGCTG ACGATTTTAT TCTTCTCCAA CGACTCCCTC
GCCTCAGTGG CGTTAAAACT TTATGAGTCA TCGTCAGAGC ACTATACCCT GCTGGCGATC
CCCTTCTTTA TTCTGTCCTC AGCCTTTCTG TCAACCGGTG GGGTGGCACG ACGGATCATC
GACTTTGCGA TGGACAGTAT CGGCCATATC CGTGGCGGTT TAGCCATGGC CTCTGTGATG
GCCTGTATGT TGTTTGCCGC GGTATCGGGT TCATCTCCAG CAACTGTGGC CGCCATCGGT
TCCATTGTTA TCGTCGGTAT GGTGAAAGCA GGTTACCCCG AAAAGTTTGC CGCCGGTGTG
ATTACCACTT CTGGCACCTT AGGGATTTTG ATCCCCCCTT CAATCGTGAT GCTAGTGTAT
GCGGCGGCGA CGGAAGTCTC GGCTGCCAGA ATGTTTATGG CGGGCTTAAT CCCAGGTTTG
ATGATGGGTT TCCTGCTGAT GATAGTGATT TATATCGTCG CCCGTTTTAA AAATCTGCCA
TCACGCCCCT TCCCTGGCTT TAAACAACTG GGGATTTCCA GTGCTAAAGC CTTAGGTGGT
CTGGCGCTGA TCATTATCGT GTTAGGTTCA ATCTATGGCG GTGTAGCCAG TCCAACCGAA
GCCTCTGCCG TAGCCTGTAT GTATGCCTAT TTCATTGCGG TATTTGGTTA TCGCGATATT
GGCCCATTGA AAAATGTCGC ATGGCGTAAC CCTAATGAGC CGATCCCCAG CGCCATTGTC
CGTAACTTAG GCCATATGGC GCTCGGACTG ATTAAAACCC CAATCGACAA AGAAATCCGC
CATGTGGTGC GCGACGGGGC AAAGGTCAGC ATCATGTTGC TGTTTATCAT TGCCAACGCC
ATGCTATTCG CCCACGTGCT GACTACTGAG CGTATTCCCC ATATCATTGC CGAACATATT
GTGGGCATGG GCTTACCTGC GTGGGGCTTC TTAATCATTG TCAACTTACT GCTGTTAGCG
GCGGGTAACT TTATGGAGCC ATCGGCCATC GTGCTGATTA TGGCGCCAAT CTTGTTCCCG
ATTGCCACCC ACTTAGGTAT CGACCCTATC CACTTAGGCA TCATCATGGT GGTGAACATG
GAGATTGGTA TGCTGACACC GCCGGTGGGG CTTAACCTCT TCGTGACGGC GGGGATCACA
GGCCGCAGTA TCGGCTGGGT GATCCAATCA GTACTACCTT GGTTAGCACT GATGTTGGCC
TTCTTGGCGC TTATCACCTA CGTGCCACAA ATCTCCCTGT TCTTGCCAGA ATTTCTGGAT
AAGCTCAACG GATATTAA
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| Protein sequence | MAIATLFTAL LVCMFLGMPI AIALGFSSML TILFFSNDSL ASVALKLYES SSEHYTLLAI
PFFILSSAFL STGGVARRII DFAMDSIGHI RGGLAMASVM ACMLFAAVSG SSPATVAAIG
SIVIVGMVKA GYPEKFAAGV ITTSGTLGIL IPPSIVMLVY AAATEVSAAR MFMAGLIPGL
MMGFLLMIVI YIVARFKNLP SRPFPGFKQL GISSAKALGG LALIIIVLGS IYGGVASPTE
ASAVACMYAY FIAVFGYRDI GPLKNVAWRN PNEPIPSAIV RNLGHMALGL IKTPIDKEIR
HVVRDGAKVS IMLLFIIANA MLFAHVLTTE RIPHIIAEHI VGMGLPAWGF LIIVNLLLLA
AGNFMEPSAI VLIMAPILFP IATHLGIDPI HLGIIMVVNM EIGMLTPPVG LNLFVTAGIT
GRSIGWVIQS VLPWLALMLA FLALITYVPQ ISLFLPEFLD KLNGY
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