| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1296 |
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| Symbol | |
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| ID | 4479870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1509711 |
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| End bp | 1510832 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725850 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_868936 |
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| Protein GI | 117919744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00794293 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAG CTGCCCGACG TTCTTGGCGT GCATTTTACC TTTGCGTGAT TGCCGTCTCC
ACCTTAACGG CCTGTCAAAA GGAAGTGACA GAGCATGCCA ACGCCACGCA ATTGCAAACC
GTGACGACGG CGCCACTGCG CTTGTCGACT AGCTATCAGA GTGAACAAGT ATTCACTGGC
ACGATCCGCG CCGGCAATAC CACGGGTGTC GGCTTCGAAC TATCGGGTAA GCTGAGTGAG
CTAACTGTCG ATAGCGGCGC TAAGGTGACG CAAGGGCAAG TATTGGCCAA GCTCGATACC
CGTTTGCTCG ATGCAGAGCA TCAGGAGATC CAAGCTAGCC TTGCGCAAAC CCAAGCCGAT
GTTGACCTTG CCACCAGCAC CCTCAACCGA AATCTTGAGC TAAAAAAATC GGGTTATGTC
TCAGAGCAGT TACTCGACGA GAACCGCACA CAACTGGCGA GTCTCGAAGC CGCCAAAAAA
CGATTATTGG CCTCGCAGCG GGCAAACCAA CTAAAACGCG ATAAATCACA GCTACTTGCG
CCCTTCGACG GCATAATCAG CCAACGACAA CACAATCTAG GGGAAGTGGT CGCCGCAGGC
AGCCCAGTGT TTACCTTAGT CGGCAGTGTG AATACCGAAG CCTATATCGG TGTTCCGGTC
GCGGTCGCTC AGCAATTCGT CAATGGGCAG AATGTGACTG TGAGCGTGCA TAATCAGCAA
TTTATCGCCA AGATCGCCGG GATCAGTGCC GAGGTAAACC CCATTAGTCG CACCCTGCAG
CTAAGGATCA GCCTGCCGGA ACATGCCAAT GTGATCAACG GTGAAATCGC CTATTTGCAT
CAACAACAAA CCGTCGAGCA AGCGGGCTAT TGGGTGCCAG TATCGGCACT TATCGATGGG
ATCCGCGGCC GCTGGAATAT CTATGTAACC ACGCCGCCTT CACATTCAAC AACCGATAGC
ATTTCAACTC AGATAGAGCG TCGCGATGTC GATATCCTCT ACACCACTCA AGATATGGCC
TACATTCAAG GCGCGATTAA GGCCGACGAA CAGTATGTGA CTCAAGGCTT ACATAAGTTA
GTGGTGGGCC AAGCCGTTTC TTCCATCGCA TCGACGAGGT AA
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| Protein sequence | MDRAARRSWR AFYLCVIAVS TLTACQKEVT EHANATQLQT VTTAPLRLST SYQSEQVFTG
TIRAGNTTGV GFELSGKLSE LTVDSGAKVT QGQVLAKLDT RLLDAEHQEI QASLAQTQAD
VDLATSTLNR NLELKKSGYV SEQLLDENRT QLASLEAAKK RLLASQRANQ LKRDKSQLLA
PFDGIISQRQ HNLGEVVAAG SPVFTLVGSV NTEAYIGVPV AVAQQFVNGQ NVTVSVHNQQ
FIAKIAGISA EVNPISRTLQ LRISLPEHAN VINGEIAYLH QQQTVEQAGY WVPVSALIDG
IRGRWNIYVT TPPSHSTTDS ISTQIERRDV DILYTTQDMA YIQGAIKADE QYVTQGLHKL
VVGQAVSSIA STR
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