| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1286 |
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| Symbol | |
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| ID | 4479860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1497710 |
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| End bp | 1498453 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639725840 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_868926 |
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| Protein GI | 117919734 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTA AGCCCCGTTT GCTGTCCGTC TCGCTCGCCG CCGTGCTGTC GGTATCGCTG
CTGGCCGTGC AGCCCGCGTC CGCGCTGACG GTGTTCGACC CGTCGAACTT CGTGCAGAAC
ACGCTGACAG CCATCCGCAC GCTGGAGCAG ATCAACAACC AGATCAACCA GCTCCAGAAC
GAAGCGCAGA TGCTGATGAA CCAGGCGCGC AATCTGGCGA AGCTGGACTT CAACATCGTC
AATCGGCTGC GCTCGACGCT CGCCACCACT GAGCGCCTGA TCGCCGAGGC ACGCGGCCTG
GCCTACGACG TGCAGAGCAT GGACGCCACG TTCGCCCGCC TGTACCCGGA GCAATATGCC
GCCACTATCA GCGGCGACCG CATGGCGCAG GACGCCCGCG AACGCTGGCA GAACACCTTG
AACGGTCTGC ACACCGCGAT GCGGATGCAG GCGCAGGTGT CGCAAAACCT TGCTCAAGAC
GAAAGTGCGC TGGCCGACCT CGTGAGCCAG AGCCAGTCGG CCACCGGCGC GCTGCAAGCC
ATGCAGGCGA CGAATCAGCT TCTCGCCTTG CAGGCCAAGC AGTCGATCCA GGCGCAGCAG
CTCCAGATCA CGCAAGACCG GGCCGCTTCG CTGGAACTGG CGCGGCAGGC GGCGGCGACC
GAACGCGCCC GCGAAGTGCG GCGGCGCTTC CTCGGCACCG GCACACCGTA CACGCCGCAG
TCCGTCAACT TCTACAACAA CTGA
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| Protein sequence | MKTKPRLLSV SLAAVLSVSL LAVQPASALT VFDPSNFVQN TLTAIRTLEQ INNQINQLQN
EAQMLMNQAR NLAKLDFNIV NRLRSTLATT ERLIAEARGL AYDVQSMDAT FARLYPEQYA
ATISGDRMAQ DARERWQNTL NGLHTAMRMQ AQVSQNLAQD ESALADLVSQ SQSATGALQA
MQATNQLLAL QAKQSIQAQQ LQITQDRAAS LELARQAAAT ERAREVRRRF LGTGTPYTPQ
SVNFYNN
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