Gene Shewana3_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1271 
Symbol 
ID4479845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1485411 
End bp1485686 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content58% 
IMG OID639725825 
ProductLysR family transcriptional regulator 
Protein accessionYP_868911 
Protein GI117919719 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGTC GGCATCTGCG TTGCCTTCTG GCCGTGGCCG AAGAACTACA CTTCGCTCGT 
GCTGCTGAAC GACTGCATAT TGAGCAGTCG CCGCTATCGC GTGCCATCAA AGAGCTGGAA
GCAGACCTGG GTGAACAGCT GTTCGTCCAT ACCAGCCGCA GCACGCGACT GACACGGGCC
GGTAAATTGT TTTTGGAGCA TGTGCCACGC GTTTCTGCGA GAACCCCGGC GTCTTTTGTC
CCACGGATCT GGCACGGGTC GAATGTGACA GCGTAG
 
Protein sequence
MECRHLRCLL AVAEELHFAR AAERLHIEQS PLSRAIKELE ADLGEQLFVH TSRSTRLTRA 
GKLFLEHVPR VSARTPASFV PRIWHGSNVT A