Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1270 |
Symbol | |
ID | 4479844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1483912 |
End bp | 1485396 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639725824 |
Product | major facilitator transporter |
Protein accession | YP_868910 |
Protein GI | 117919718 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCTT TATCGCGATG GAGATGCAAT ATGAACGATG ATTCTCATCT TTTCACAACC TGTACCGCCC CTGCCAGACG TCCCCCATGG CTCGGGTTGT CCGTCCTGTT GCTGGCTGGC TTCGTCACCA TCTTTGACCT GTTTGTGGTC AATGTGGCCA TCCCCAGCAT GCAAGCAAAC TTGGGGGCGA GCTTTGCGCA GATTGGCTTT ATCGTCGCGG GTTATGAACT GGCCTTCGGT GTATTGCTTA TTATGGGCGG ACGATTAGGC GATTTGTTTG GTCGCCGCCG GTTATTCATC GTTGGTATGG CGGGATTCAC GTTGGCATCG GCGATGTGTG GGTTAGCCCC CAGCGCAGAA ATTTTGATCG TTGCGCGCGT GTTGCAGGGC CTAGCTGCTG CATTACTGTT CCCGCAGGTC TATGCTTCCA TTCGCGTGAA TTTCGACGGC GACGATAGTC GGCGCGCCTT TGGCTTGCTG GGTATGACGC TGGGCCTGGC CGCCATCGCT GGCCAGGTGC TGGGTGGTTG GCTGGTGCAT GCCGATCTGT TCGGATTAAG CTGGCGTACG ATCTTCCTCA TCAACGTACC TATCGGGCTG TTCGCGATCA CCGCAGCATC TTGCATTCCC GAGTCCAGAG CCGAGCAAAG CCCGGCACTG GATTGGAGTG GTGTGATACT GGTCAGTAGT GGGCTGGCAC TCTTGCTGGT GCCGCTGATT GAGGGGCCTG GGCAAGGCTG GCCTGCCTGG AGCCTGTGGA GCTTAGGCGG CGCCGTAGCG CTGATGGTGA CGTTTTATCG GTATCAGGAG CGTCAGCGAA TCGCCGGACG TTTTCCGTTA GTGGATATGC AACTGATGAG GCAGCGTCGC TTTGCGCTGG GAGCCTTGTT GGTTCTGCTA GTCTATTCCA CATCCAGCTC ATTCTTTTTG TCCTTTGCCT TGCTGGTGCA AACCGGTTTG GGGCTTGACC CCTTCGTCGC GGGCAGCATC TTCGCACCAT GCAGCGTGGG CTTCGTCTTG GCATCACTAA CCGCACCCCG GCTAGTGGCA CTATGGGGAG CGCGCGCTAT CGTCGCAGGC GCGTTGGTCT ACGCGATTTC CATCGGGCTG CTGATTACGC AAGTGCAGAT GGCTGGCGCA GAGCTGCTGC CGGTAACGTT GATTCCCGTG TTAATCATAG TCGGAGCTGG TCAGGGTTTA ATAATGACGC CACTACTGAA CCTGGTACTG GGCTTTGTAA AGGAGAACCA AGCTGGTATG GCGTCTGGTG TGATTTCCAC TGTTCAGCAG GTCGGTGCTG CATTGGGTGT AGCCATAGTC GGCATCCTGT TCGGGACGGC GTTGACCGCA AGTAACGGTG CGTTAGCGCA AGCGGACCAA TACGCTTCGG CCTTTGTCTC GGGAATGCTC TACAACTTGG GTGCCGCGCT ACTTATATGC TTTTTGTTGC TTATTCTGGC AAGGTCGCAA AGGTCGGCTA GCTAG
|
Protein sequence | MIALSRWRCN MNDDSHLFTT CTAPARRPPW LGLSVLLLAG FVTIFDLFVV NVAIPSMQAN LGASFAQIGF IVAGYELAFG VLLIMGGRLG DLFGRRRLFI VGMAGFTLAS AMCGLAPSAE ILIVARVLQG LAAALLFPQV YASIRVNFDG DDSRRAFGLL GMTLGLAAIA GQVLGGWLVH ADLFGLSWRT IFLINVPIGL FAITAASCIP ESRAEQSPAL DWSGVILVSS GLALLLVPLI EGPGQGWPAW SLWSLGGAVA LMVTFYRYQE RQRIAGRFPL VDMQLMRQRR FALGALLVLL VYSTSSSFFL SFALLVQTGL GLDPFVAGSI FAPCSVGFVL ASLTAPRLVA LWGARAIVAG ALVYAISIGL LITQVQMAGA ELLPVTLIPV LIIVGAGQGL IMTPLLNLVL GFVKENQAGM ASGVISTVQQ VGAALGVAIV GILFGTALTA SNGALAQADQ YASAFVSGML YNLGAALLIC FLLLILARSQ RSAS
|
| |