Gene Shewana3_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1247 
Symbol 
ID4477167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1460685 
End bp1461503 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content55% 
IMG OID639725802 
Producthypothetical protein 
Protein accessionYP_868888 
Protein GI117919696 
COG category 
COG ID 
TIGRFAM ID[TIGR02391] conserved hypothetical protein TIGR02391 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCAC AAATTGCCCC ATTCAGTTCT CAGCACCTGG AAGCTGCCTG CCGCGTTCTT 
GCCGATACGG CACAAGGTCT GACCGGCACG CAAATCGGGC GTTTGTTGCA AGAAACCCAG
GTAGCCGACC CCTCACCAGA TATGACCAAG TGGAAACGGC TGTTCAATGC GTTGGCAGGC
GCTCAGAACC AGCATCAGGT TGGCAACCAT CTCATCATGT TCATCAATCG CGCGATGAAT
CCGGTGAGTT ACGCAAGCGA TCCCGGAACA TTTGCTTGGC GCCGTGATGA ACTCAATGTT
GTTTTGGCGT TCTCGGGTTT CTACGTGCGT GAAGATGGCA AAGTCGGATA TGCCGATAAG
GCCAATACGC TGGACGAAGC CCGTGCACGA GCCGGGCGAC TCAAGGCGGC GCTGGAAAGT
CGCGCTGTAC ATGTAGAAGT CCTGAACTAC TGTCGCGTAG AACTCATGGA CGAGAACTAT
TTTCACGCGG TATTTGAAGC GACCAAGGGC GTTGCCGAGC GGATTCGCCA GCTCTCGGGG
CTGAGTGGCG ATGGTGCTGA CCTTGTGAAT AAGGCATTTG GCGGTCAGCA ACCTGTACTT
GTCTTGAAGG CGCTGAGTAC GGAGTCTGAA AAAAGCGAGC AGAAAGGCTT TGTGAACCTG
CTGATCGGTC TGTTTGGAGC GGTACGCAAT CCGCTTGCCC ATGCCGCGAA AACGAATTGG
CCTATGTCCG AACAGGACGC CTTGGACATC CTGACGCTGG TATCGCTGAT TCATCGTAAG
TTGGATGGCG CCACGAGACT AACTGCCGTA TCGGCGTAA
 
Protein sequence
MASQIAPFSS QHLEAACRVL ADTAQGLTGT QIGRLLQETQ VADPSPDMTK WKRLFNALAG 
AQNQHQVGNH LIMFINRAMN PVSYASDPGT FAWRRDELNV VLAFSGFYVR EDGKVGYADK
ANTLDEARAR AGRLKAALES RAVHVEVLNY CRVELMDENY FHAVFEATKG VAERIRQLSG
LSGDGADLVN KAFGGQQPVL VLKALSTESE KSEQKGFVNL LIGLFGAVRN PLAHAAKTNW
PMSEQDALDI LTLVSLIHRK LDGATRLTAV SA