| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1212 |
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| Symbol | |
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| ID | 4477132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1416229 |
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| End bp | 1417965 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639725767 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_868853 |
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| Protein GI | 117919661 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTA AACGACTCAC AAGTCTAAAA CATAAAATTA CGCTGGCCTT TTATATCATT
CTGGGCATGG CGTTGCTTAA TGGCGTTATC GCTATCCTAT TGTCACAACA GCTAAGGTCG
GAAATCGAAC TCTTGGTTAA TAGCGATGTG GTGAAAGTGA CAACCGCGCT GCAACTGGCA
AAAAACAGTG AAAGACTGCA AATCATCACC ACTGAGTTAA ACCATTATGA TACCGAGGAG
CAGCGCCTAC GTTTGTTGCA AGAACTCACA AGCCAATGGG AACACTTGCT TAGGGATACC
AAAACCCTCG CCAGCATGGA AACCTCGCCG CATATGCATG AGGCGCTTAA CCACGCCATA
GACACTCAAC TTTATTATCA GCAGCAATTA CCCCTGCTCA ACACTTTGAC CGACACAGCG
CTGCAAGCCA AATTCCAAGC CCAGAATATT CAGGCGAATC TCTCGGGGAT GGCAATAGCA
TTTTCCGATA GCATGCAAAC TCAGTTGCAG CAAATTCATG GCCACTATAA CCGCTTAATC
GCCCAAAAGC AGTTGAATGC AATTGCAGAG AATCTATCAG AAGATCAAAA ACTTTCAGCA
TTTCTTCATC AGGGCGAGCA TCTGTTTGTG CTCCTCGATA ACGTAAAAAA TGTGACAAGC
CTTGTCGAGC TTAACCAATT ACAACGGGAT GGGATGCGCC GACTGATAAC CATGGACAAC
ATCTCGCGCT CCTTTAATCA AGACAGCGCC ATTTATATCG ACTGGTTATC GCAAATCAGG
CAAAACATGG TGGGTAAAGA CAACCTTTTT GACCTCTCCC GTAACGCGCT AAAAAGCACC
CAAATTGCCA ATGCACATTT TGGCTATCAA GCTGGTGCGG CGCAGGAAAT CGCCTCCTTT
ACCCAAGAAT TAGTCAACCA TGTAGAAGAA GAAATTCAAC TCGCGGGCGC AAATCTTAAG
AGTGACAGCA CATCCTTCGT GATTTTGATC TTTTGTGGCG GCATTCTCTA TTGCTTCTTT
ATCTGGCTCA CCAGTTGGCA TTTTATCGCT AAAGGCATCA TTAAGCCTGT TATCGCCACC
CGTGATGCCA TGAATGCCAT CGCCAATGAA AAACTCGACA CCCAAATGCC CATTACCGAT
AACCTCGAGC TACAACAGAT GGTGAGCTCG CTCGAAACCC TTAAAACCTA TGCGGCTCAG
GTTAAAGCCA TGGCCGAAAC CGACGGATTA ACCGGCTGTT ATAATCGCCG CTATTTAGAC
AGCCAAATTC AGAAGGAATT GATTTACGCT AACGATCATA ATATGCCCCT CAGCATTGTG
ATGTTCGATA TCGATAACTT TAAGCAATTT AACGACAGAT ACGGCCATGT ACTGGGCGAT
CAATGCTTAA AGCAAATCGT CAATGCCGCC AAATCGATTC TGCAACGGCC GACGGATATT
CTTGCCCGCT ATGGGGGGGA GGAATTTATG CTGTTACTGC CCTCAAGCCA TCTAGAGGAT
GCCTACAAAA TTGCCGAACG TTTGCGCAAA GCCATCATCG CCCTGCACAT TCCCCATGAG
GACTCCTCCC ATTCGGGATT AGTGACCATC AGCTTAGGTG TAGCCTGCTG GCAACCGTCA
CAATTAATCG ACACCAATAG ACTCCTTTGC CAGGCCGATG AAGCACTTTA TCAAGCCAAA
CAACAGGGCC GAAACCGCAC CGAAGTTTTG CTCAACACCC CCTCACTTTA TCCGTAA
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| Protein sequence | MNAKRLTSLK HKITLAFYII LGMALLNGVI AILLSQQLRS EIELLVNSDV VKVTTALQLA
KNSERLQIIT TELNHYDTEE QRLRLLQELT SQWEHLLRDT KTLASMETSP HMHEALNHAI
DTQLYYQQQL PLLNTLTDTA LQAKFQAQNI QANLSGMAIA FSDSMQTQLQ QIHGHYNRLI
AQKQLNAIAE NLSEDQKLSA FLHQGEHLFV LLDNVKNVTS LVELNQLQRD GMRRLITMDN
ISRSFNQDSA IYIDWLSQIR QNMVGKDNLF DLSRNALKST QIANAHFGYQ AGAAQEIASF
TQELVNHVEE EIQLAGANLK SDSTSFVILI FCGGILYCFF IWLTSWHFIA KGIIKPVIAT
RDAMNAIANE KLDTQMPITD NLELQQMVSS LETLKTYAAQ VKAMAETDGL TGCYNRRYLD
SQIQKELIYA NDHNMPLSIV MFDIDNFKQF NDRYGHVLGD QCLKQIVNAA KSILQRPTDI
LARYGGEEFM LLLPSSHLED AYKIAERLRK AIIALHIPHE DSSHSGLVTI SLGVACWQPS
QLIDTNRLLC QADEALYQAK QQGRNRTEVL LNTPSLYP
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