| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1054 |
|---|
| Symbol | torD |
|---|
| ID | 4476600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1235485 |
|---|
| End bp | 1236114 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639725597 |
|---|
| Product | chaperone protein TorD |
|---|
| Protein accession | YP_868695 |
|---|
| Protein GI | 117919503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG TCGATATCAA TCATGCCAGA GCCTTAGTGT ATCAGCTGCT GTCTTCTCTG
TTTGCCCGTG AAATTGATGA GCAGCGCCTT AAGCAACTCA CCAGTGAGCA AGCCCAGCAA
TTCTGGACAC AACTGGGTTA TGCGCCCGAG TTTAGTGCGT CAGTGGCCAG CATACAGAAG
GTGCTAAATG GCTTAACGAG CGATGAAGCC TTGCTCGAAC TGGCCGCCGA TTACTGCGGT
TTATTCCTCG TAGGCACAAA GCACAGCGCC TCACCCTATG CCAGCCTGTA CTTGAATCGC
GAGGAAGAAC CCTTGCTATT TGGGCAGCAG CATCAACAAA TGAGCGAGTT TTTACACCAG
AGCAAACTAC AAGTACAGAG TCACTTCCCT GAGCCTGCCG ATCACTTAGC CGTGATCTTA
GCCTATATGG GACACTTAGC TTGCCACAGT GAAGATGCCG CCCAGTTAAG CTTTCTAAAT
GCCTGTATAG ACTCATGGTT AGCCAAGTTT GTCGCCAAGG TCGTTGAGTG CGATAGCAAG
CACAGCAATG GCTTTTACAG CGCTCTCGCC ACACTCACCT TGGCTTGGGT GCAGCAAGAT
AAACAGCAGT TAGAACAGGC AATGCATTAA
|
|---|
| Protein sequence | MSNVDINHAR ALVYQLLSSL FAREIDEQRL KQLTSEQAQQ FWTQLGYAPE FSASVASIQK
VLNGLTSDEA LLELAADYCG LFLVGTKHSA SPYASLYLNR EEEPLLFGQQ HQQMSEFLHQ
SKLQVQSHFP EPADHLAVIL AYMGHLACHS EDAAQLSFLN ACIDSWLAKF VAKVVECDSK
HSNGFYSALA TLTLAWVQQD KQQLEQAMH
|
|---|
| |