Gene Shewana3_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0961 
Symbol 
ID4478887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1127762 
End bp1128826 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content33% 
IMG OID639725494 
Producthypothetical protein 
Protein accessionYP_868602 
Protein GI117919410 
COG category[S] Function unknown 
COG ID[COG4748] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0478229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA TTGAACGTAT AAATGTTTTA GCAAAACGTA TTCCACAAAT TCAAAGCAAT 
TTGCAGACTG AGGAAGCTAC AAAAAACGCC TTAATTATGC CTTTCTTAGA TAAAGTATTA
GGATGGGATG TATACGACCC AACGGAAGTT ATTCCAGAGT TTACTGCTGA TACGATAAAC
AAAAAGGGTG AAAAAGTTGA TTACGCTTTA ATGAAGGATG GAGAGGTTCA AATACTCATC
GAATGTAAGA AATATGGTGA AAAGCTTACA ATTAAACATG CTTCGCAATT ATTTAGATAT
TTTTCAGTTA CTAATGCCCG TCTTGCAATA CTTACTAACG GTTCAGAATA TCAAATATTT
ACTGACTCCG ATGCTCCAAA TAAAATGGAT GAAAAGCCAT TTTTGAAATT TGATTTAGAA
GATATAGATG AACATATTAT TCCAGAAGTT AGGAAACTCG CTAAATCTGT ATTTAATATT
GATTCTATTG TAAGTAGCGC TGGAGAGTTA AAGTACCTCA GTCAAATTAA GAAAATTGTG
GCTGAGCAAT TCAAAGAGCC AGAGGAGGAG TTTGTAAGAT TTTTTGCTTC AAGAACGTAT
GAAGGTACTT TAACACCAAA AGTGAAGCAA CAATTTCATG ATATAACGCA AAAAGCTTTG
ATGCAGTTTT TGAGTGATAG CATTAATGAA AGAATAAAAA CAGCATTAAA TAATGATAAG
TTAACTGAGG TACCACAAAC CGATGTACCT TCAACTCCCG AGGAAGAAAA GAATAAAGTA
ATAACGACAG AAGAAGAGGT TGAAGGTTAT AACATTATCA AAGCTATCCT AAGACAGAAG
GTTGATTTGA GTCGTGTTGT TGCTAGGGAT ACACAAAGTT ATTTCGGTAT ATTGCTTGAT
GATAACAACC GTAAACCACT CTGTAGATTA CATTTTAATG CAAAGCAGAA ATATCTAGGC
CTTTTAGATG CTGAAAAGAA TGAAACAAGG CATCCAATTA ATAACTTAGA TGAGATATTT
AACTTTAGTG AGCAATTGAT GAATACAGTC AACTTTTATG AGTAG
 
Protein sequence
MDFIERINVL AKRIPQIQSN LQTEEATKNA LIMPFLDKVL GWDVYDPTEV IPEFTADTIN 
KKGEKVDYAL MKDGEVQILI ECKKYGEKLT IKHASQLFRY FSVTNARLAI LTNGSEYQIF
TDSDAPNKMD EKPFLKFDLE DIDEHIIPEV RKLAKSVFNI DSIVSSAGEL KYLSQIKKIV
AEQFKEPEEE FVRFFASRTY EGTLTPKVKQ QFHDITQKAL MQFLSDSINE RIKTALNNDK
LTEVPQTDVP STPEEEKNKV ITTEEEVEGY NIIKAILRQK VDLSRVVARD TQSYFGILLD
DNNRKPLCRL HFNAKQKYLG LLDAEKNETR HPINNLDEIF NFSEQLMNTV NFYE