Gene Shewana3_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0893 
Symbol 
ID4477104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1040010 
End bp1040960 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content50% 
IMG OID639725429 
Producthypothetical protein 
Protein accessionYP_868537 
Protein GI117919345 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.2877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCATCAC TCAAGTCCCC TTGCCATACT GCACAAAATT TACGTCTCGG GCTTGCCATG 
TGGTCGCATA ACCATTGGCA AGAAAGTGTT TATGGTTCAA GCACTAAACA AGCTGAAAGA
CTTGCTCGCT ATGCCAGTAT CTTCAACACA GTGGAAGGCA ACACCAGCTT TTACGCGACG
CCAAATGCGC AAACAGTGAT GAATTGGCAC AGCGCCACTC CCGATGATTT TCGCTTTACC
TTTAAACTGC CACAAACCAT CACCCATCAA AAGCAGTTGC AGGATTGTCA GCAGGAGTTA
TTGGCCTTCT TCCAAGTGAT GTCGCCCTTG GTTGAAAAAA CTGGCTTGTG GAAAATTCAG
CTTCCCGCTT CCTTCGGCCC CGAACAGCTG CCAGTGTTAG CAGGTTTTTT TGATCTTTTA
CCGCAAGGTT TAAACTATGG CGTCGAGGTT CGCCATTTAG CCTTTTTTGC CAAGGGAGAC
GCCGAGCGAA CACTGAATCG CCTGCTGATG GACAGACAAA TCAATCGCAT CATCATGGAC
AGTCGACCGC TGTTTGCCCT GCCGCCCGCC AACGAGGCGA TTATTGATGC TCATAAGAAA
AAGCCACAGG TGCCCGTTCA CGCTATCGCG ACCGCCCATA CGCCCGTGGT GCGTTTTATT
GGCCAAACGG ATGGCACGAT TGAAGCATTG GCGGCGAGTA ACGATAAATT GCAGGTGAAG
AATAACGATA GCTTTTTTAA CAACTGGCTA AGGCAACTCG CACTCTGGAT AAAAGAGGGG
CGCGAGCCTT ATCTGTTTAT TCATACGCCC GATAACCAGA CCGCGCCCGA ATTAGCGGTA
CGTTTATACC AGCAGTTGCA GCAACAACTG GCCGATGAGG TCAGCTTGCC CACTATTCAG
TTGCATAAAG CGTTGGCAGA GTCTGCCGCG CAGATGCAAC TGACGTGGTA A
 
Protein sequence
MASLKSPCHT AQNLRLGLAM WSHNHWQESV YGSSTKQAER LARYASIFNT VEGNTSFYAT 
PNAQTVMNWH SATPDDFRFT FKLPQTITHQ KQLQDCQQEL LAFFQVMSPL VEKTGLWKIQ
LPASFGPEQL PVLAGFFDLL PQGLNYGVEV RHLAFFAKGD AERTLNRLLM DRQINRIIMD
SRPLFALPPA NEAIIDAHKK KPQVPVHAIA TAHTPVVRFI GQTDGTIEAL AASNDKLQVK
NNDSFFNNWL RQLALWIKEG REPYLFIHTP DNQTAPELAV RLYQQLQQQL ADEVSLPTIQ
LHKALAESAA QMQLTW