Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0839 |
Symbol | |
ID | 4477050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 971433 |
End bp | 972635 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725375 |
Product | AFG1 family ATPase |
Protein accession | YP_868483 |
Protein GI | 117919291 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.733304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATT CCATGGTCTT AAACCCACTC ACAACTGCAA CTATTCCCCA ATCACCTCAG GCCATTTATC AAGCCAAGAT CGGCGCCGAG CTGATTGAAG ATCCCGCGCA AGCACAGGCG GTACTCGCCT TAGATGAGCT GTATCAGCAG ATTATTGGCC AAACAGATGC TCAGCCACCC AAGGGCTTGT ATCTGTGGGG CGATGTCGGC CGGGGTAAGA CCTTTCTTAT GGATTTGTTC TTCGATGCCC TGCCACAACA GGGAAAGCTC AGGCTGCACT TTCATCGCTT TATGGCGCGG GTACACCAAG CCTTAAAAGA ACATGCAGGG CAGCGCGATC CTCTTAAGTT GATCGCAAAA AATTTAGCGC AGGAGTGCAA GGTACTCTGT TTCGATGAGT TTTTTGTATC AGACATAGGG GATGCCATGA TCCTCGCCGG TTTGTTTGAA ACCTTGTTTG CCCAAGGGGT GGTGCTAGTC GCCACATCCA ACATTCCCAT CGAACGCTTA TATGAGAATG GTCTTGCCAG ACACAGATTT TTACCCTGCA TTGCCCTGCT CCAAGCCCAT ACCCAAATGC TGCATTTGAA TGGCGAGCAA GACCACAGGT TGCACGCCTT GAATCACGAA CCGTCGGCAG AGTCCATTGC CGCCACCTCA AAGAATATTG GCCTGACTGC CACAGTGGAT TTCGAGGCCA TTTTTAAGGC GCTGACGCAT GGCGCGCCCG TGCTTGAAGC GAGCACGCTG CGCATCTGTC AGCGGGATAT TCCCGTCGTG CGCGCCACTG CTGAAGGCCA GTTGCCATCG GTCGCTTGGT TTGATTTTCA TGCCCTGTGC GATGGCCCGC GCTCGCAACT CGACTATATT GAAATTGCGA GCCGATTTAA GGTGTTAATG CTAAGCAATG TGCCCAGACT TGGGGGCGAA GTAAAAGGCT GGATCCGCGC CCGCGGCACT GAAGATGGCA CAGGCGACAA CCAAGCGGCC ACTACGGGAG AGCGGCAACT GTCCTACGCC GCTAACGACG ACCCCGCACG GCGTTTTATC AGCCTTATCG ATGAGTTATA TGATCAAGGG GTGAGCTTAT ATTTAAGTTG CGACGTGCCA CTGAGCGAAC TCTACCAAGG CGGCGCCCTC AGTTTTGAGT TTCGCCGTAC CTATAGTCGG CTCATTGAAA TGAGCCAGCA AAGAGTAGAA TGA
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Protein sequence | MTNSMVLNPL TTATIPQSPQ AIYQAKIGAE LIEDPAQAQA VLALDELYQQ IIGQTDAQPP KGLYLWGDVG RGKTFLMDLF FDALPQQGKL RLHFHRFMAR VHQALKEHAG QRDPLKLIAK NLAQECKVLC FDEFFVSDIG DAMILAGLFE TLFAQGVVLV ATSNIPIERL YENGLARHRF LPCIALLQAH TQMLHLNGEQ DHRLHALNHE PSAESIAATS KNIGLTATVD FEAIFKALTH GAPVLEASTL RICQRDIPVV RATAEGQLPS VAWFDFHALC DGPRSQLDYI EIASRFKVLM LSNVPRLGGE VKGWIRARGT EDGTGDNQAA TTGERQLSYA ANDDPARRFI SLIDELYDQG VSLYLSCDVP LSELYQGGAL SFEFRRTYSR LIEMSQQRVE
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