Gene Shewana3_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0839 
Symbol 
ID4477050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp971433 
End bp972635 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content53% 
IMG OID639725375 
ProductAFG1 family ATPase 
Protein accessionYP_868483 
Protein GI117919291 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.733304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT CCATGGTCTT AAACCCACTC ACAACTGCAA CTATTCCCCA ATCACCTCAG 
GCCATTTATC AAGCCAAGAT CGGCGCCGAG CTGATTGAAG ATCCCGCGCA AGCACAGGCG
GTACTCGCCT TAGATGAGCT GTATCAGCAG ATTATTGGCC AAACAGATGC TCAGCCACCC
AAGGGCTTGT ATCTGTGGGG CGATGTCGGC CGGGGTAAGA CCTTTCTTAT GGATTTGTTC
TTCGATGCCC TGCCACAACA GGGAAAGCTC AGGCTGCACT TTCATCGCTT TATGGCGCGG
GTACACCAAG CCTTAAAAGA ACATGCAGGG CAGCGCGATC CTCTTAAGTT GATCGCAAAA
AATTTAGCGC AGGAGTGCAA GGTACTCTGT TTCGATGAGT TTTTTGTATC AGACATAGGG
GATGCCATGA TCCTCGCCGG TTTGTTTGAA ACCTTGTTTG CCCAAGGGGT GGTGCTAGTC
GCCACATCCA ACATTCCCAT CGAACGCTTA TATGAGAATG GTCTTGCCAG ACACAGATTT
TTACCCTGCA TTGCCCTGCT CCAAGCCCAT ACCCAAATGC TGCATTTGAA TGGCGAGCAA
GACCACAGGT TGCACGCCTT GAATCACGAA CCGTCGGCAG AGTCCATTGC CGCCACCTCA
AAGAATATTG GCCTGACTGC CACAGTGGAT TTCGAGGCCA TTTTTAAGGC GCTGACGCAT
GGCGCGCCCG TGCTTGAAGC GAGCACGCTG CGCATCTGTC AGCGGGATAT TCCCGTCGTG
CGCGCCACTG CTGAAGGCCA GTTGCCATCG GTCGCTTGGT TTGATTTTCA TGCCCTGTGC
GATGGCCCGC GCTCGCAACT CGACTATATT GAAATTGCGA GCCGATTTAA GGTGTTAATG
CTAAGCAATG TGCCCAGACT TGGGGGCGAA GTAAAAGGCT GGATCCGCGC CCGCGGCACT
GAAGATGGCA CAGGCGACAA CCAAGCGGCC ACTACGGGAG AGCGGCAACT GTCCTACGCC
GCTAACGACG ACCCCGCACG GCGTTTTATC AGCCTTATCG ATGAGTTATA TGATCAAGGG
GTGAGCTTAT ATTTAAGTTG CGACGTGCCA CTGAGCGAAC TCTACCAAGG CGGCGCCCTC
AGTTTTGAGT TTCGCCGTAC CTATAGTCGG CTCATTGAAA TGAGCCAGCA AAGAGTAGAA
TGA
 
Protein sequence
MTNSMVLNPL TTATIPQSPQ AIYQAKIGAE LIEDPAQAQA VLALDELYQQ IIGQTDAQPP 
KGLYLWGDVG RGKTFLMDLF FDALPQQGKL RLHFHRFMAR VHQALKEHAG QRDPLKLIAK
NLAQECKVLC FDEFFVSDIG DAMILAGLFE TLFAQGVVLV ATSNIPIERL YENGLARHRF
LPCIALLQAH TQMLHLNGEQ DHRLHALNHE PSAESIAATS KNIGLTATVD FEAIFKALTH
GAPVLEASTL RICQRDIPVV RATAEGQLPS VAWFDFHALC DGPRSQLDYI EIASRFKVLM
LSNVPRLGGE VKGWIRARGT EDGTGDNQAA TTGERQLSYA ANDDPARRFI SLIDELYDQG
VSLYLSCDVP LSELYQGGAL SFEFRRTYSR LIEMSQQRVE