| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0688 |
|---|
| Symbol | |
|---|
| ID | 4476898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 804136 |
|---|
| End bp | 804576 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639725223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_868332 |
|---|
| Protein GI | 117919140 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.68886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00534033 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAATATCT CTCATCTCAG CGGATTGGAA CATTTAAGCG CTATCATCAA CGGCGACATA
CCACCTCCAA CGATTTTTGA CACTATGGGT ATGTTTAATC TTCAAGTGAG CTCCGGCGCG
GTTGTATTGG GTTGCTGTGC AACGGAACAA CATTGTAATC CTATGGGAGG CGTACACGGA
GGGTTTGCTG CAACGATATT GGATTCTGTC ACCGGATGCG CTGTACATAG CCTGCTAGAA
GCCGGTGTTA GCTACGGGAC TGTGGATTTA GCCGTTAAAA TGATGAGACC TGTCCCCATG
AATGAGCAGC TTATTGCTGA AGCGAAAGTG ACACATATTT CTCGCTCGCT GGGTATTGCC
GAAGGCACGA TTCGAAACAG TGAGGGGAAG TTACTTGCGA GCGGTTCTGC CACTTGTTTT
ATCAAGAGGC CAAACTTTTA A
|
|---|
| Protein sequence | MNISHLSGLE HLSAIINGDI PPPTIFDTMG MFNLQVSSGA VVLGCCATEQ HCNPMGGVHG
GFAATILDSV TGCAVHSLLE AGVSYGTVDL AVKMMRPVPM NEQLIAEAKV THISRSLGIA
EGTIRNSEGK LLASGSATCF IKRPNF
|
|---|
| |