Gene Shewana3_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0688 
Symbol 
ID4476898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp804136 
End bp804576 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content47% 
IMG OID639725223 
Producthypothetical protein 
Protein accessionYP_868332 
Protein GI117919140 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.68886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00534033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATATCT CTCATCTCAG CGGATTGGAA CATTTAAGCG CTATCATCAA CGGCGACATA 
CCACCTCCAA CGATTTTTGA CACTATGGGT ATGTTTAATC TTCAAGTGAG CTCCGGCGCG
GTTGTATTGG GTTGCTGTGC AACGGAACAA CATTGTAATC CTATGGGAGG CGTACACGGA
GGGTTTGCTG CAACGATATT GGATTCTGTC ACCGGATGCG CTGTACATAG CCTGCTAGAA
GCCGGTGTTA GCTACGGGAC TGTGGATTTA GCCGTTAAAA TGATGAGACC TGTCCCCATG
AATGAGCAGC TTATTGCTGA AGCGAAAGTG ACACATATTT CTCGCTCGCT GGGTATTGCC
GAAGGCACGA TTCGAAACAG TGAGGGGAAG TTACTTGCGA GCGGTTCTGC CACTTGTTTT
ATCAAGAGGC CAAACTTTTA A
 
Protein sequence
MNISHLSGLE HLSAIINGDI PPPTIFDTMG MFNLQVSSGA VVLGCCATEQ HCNPMGGVHG 
GFAATILDSV TGCAVHSLLE AGVSYGTVDL AVKMMRPVPM NEQLIAEAKV THISRSLGIA
EGTIRNSEGK LLASGSATCF IKRPNF