Gene Shewana3_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0686 
Symbol 
ID4476896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp802841 
End bp803701 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content45% 
IMG OID639725221 
Producthypothetical protein 
Protein accessionYP_868330 
Protein GI117919138 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0130174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAA CATCGTTTTA CACGGAAGAT CATTATTTAC TCCGTGGCCA GCTGTTTTGC 
ACAGAAAAGG CTATGCAAGG TCGAGTCATT GTTGCGGGGG CGACTGGTGT GCCGCAGGCG
TTTTATCGCC GCTTTGCTCA ATTTGCAAGT GAACAAGGAT TTGAAACATT AACCTTTGAT
TACCGTGGAA TAGGACAATC CAAACCTGAA ACGCTAGAGG GTTTTGAAAT GAACCTTCTC
GACTGGGGTA AACAAGATCT CGCTGCCGCA GTCCAGTTTA TGAGTAAAGA TGACGCCCCA
CTCTTTATTG TTGGCCATTC CTATGGTGGT CATGCATTTG GTTTACTGCC AAATCATCAA
AAAGTCACAG GTGCTTATAT ATTTGGTACA GGCGCGGGGT GGCATGGTTA TATGCCCTTG
TTTGAACAAG CTAAAGTACT AACGATGTGG AATATCGTTC TGCCGCTCCT AACGTGGTGG
AAGGGATACT GCGCTTGGAA CCTATTGGGA ATGGGCGAAG ATCTGCCAAA AAACGTGTTT
AAGCAATGGC GGCACTGGTG TCGTTTTCGT CATTACTTTT TTGATGATCC CACCATGGAT
GGAATTGAAA AACTCTTCCA ATCGGTACAG ACCCCTATGG TTGCAGCCAA TGCGCTAGAT
GATCTTTGGG CTATGCCTGA ATCGCGAGAT GCGTTTATTC AGCACTACAG TAATGCGCCA
TTAACCCGTC TTGATCTCTC TCCAAAGATC TTAGGCGGCA AGATTGGGCA TATGGGGTAC
TTCCGTAAAA ACGCGATTCC TCTATGGCAA GCCAGTTTAG ATTGGTTCAC GGCGATTAAT
AAGGAAAATA AAGCAATATG A
 
Protein sequence
MISTSFYTED HYLLRGQLFC TEKAMQGRVI VAGATGVPQA FYRRFAQFAS EQGFETLTFD 
YRGIGQSKPE TLEGFEMNLL DWGKQDLAAA VQFMSKDDAP LFIVGHSYGG HAFGLLPNHQ
KVTGAYIFGT GAGWHGYMPL FEQAKVLTMW NIVLPLLTWW KGYCAWNLLG MGEDLPKNVF
KQWRHWCRFR HYFFDDPTMD GIEKLFQSVQ TPMVAANALD DLWAMPESRD AFIQHYSNAP
LTRLDLSPKI LGGKIGHMGY FRKNAIPLWQ ASLDWFTAIN KENKAI