| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0660 |
|---|
| Symbol | |
|---|
| ID | 4476870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 782039 |
|---|
| End bp | 782809 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639725195 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_868304 |
|---|
| Protein GI | 117919112 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.12207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTA ATGTTAGGAC GACATTTTTC AGCTTCGCAA AGGGACATTT GCTTGCACCT
TGGCTTGTGT TTGCGGTGAT TATTTTTTGG CTCGAACTGA CCCATGCCGA TATGCGATTC
GCCAGCTTGT TATTTCACTG GCAGGGTGGG GTCGATTCTT GGCCTTTGCG TGGCCATTGG
TTGACTGAGA ATCTACTGCA TGTCACTGGG CGAAATCTGG TGATTCTGCT TGCCGTTGTC
GTGGTTAGCT GCATTGGCTT AAGCTTTCGC GTCGACAAGT TGCGACCTTA TCGTAAAGGT
TTTATCTATT TGTTTTGCAG TGTGCTAGCG AGTGTGGTCT TGGTGCGCCT TGGTAAGAGT
CTTACCCATA TGACTTGTCC CTGGGATGTG CTTGAGTTTG GCGGTCGCAT GCTGCACTCA
TCCCTATTTG CTCGCTTGCC AGAGGGGGCT GAGTTTGGTC AGTGTTTCCC CGGTGGACAT
TCGAGCGGCG GTTTTGCTTG GGTAGCAAGC TATTATGTGC TGAAGGAATA CCGACCCCAG
TATGCTAAGA CCGGCTTAAT CTTCGGTATT GTTTTAGGTG CGCTGTTTGG TTTTGCGCAG
GAGCTTCGTG GTGCCCATTT CTTAAGCCAT GATTTATGGA GTTTGGCCAT CGCTTGGACA
TCCGCTAGCT TGCTCTATTA TGGCTTCTTC CTGCGTGTGC CCAAGGTCAA CAAGATTAAA
GTCGCCAACA AAATCAGTAT TATTAGTACC AAAGAAGCCA TCTCTAAGTG A
|
|---|
| Protein sequence | MKSNVRTTFF SFAKGHLLAP WLVFAVIIFW LELTHADMRF ASLLFHWQGG VDSWPLRGHW
LTENLLHVTG RNLVILLAVV VVSCIGLSFR VDKLRPYRKG FIYLFCSVLA SVVLVRLGKS
LTHMTCPWDV LEFGGRMLHS SLFARLPEGA EFGQCFPGGH SSGGFAWVAS YYVLKEYRPQ
YAKTGLIFGI VLGALFGFAQ ELRGAHFLSH DLWSLAIAWT SASLLYYGFF LRVPKVNKIK
VANKISIIST KEAISK
|
|---|
| |