Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0626 |
Symbol | |
ID | 4476836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 735102 |
End bp | 736592 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639725162 |
Product | hypothetical protein |
Protein accession | YP_868271 |
Protein GI | 117919079 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.339165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTTG CTTCCCTAGA AGAGCGATTA GCAGACTATG GCTCACAGGG CTATTTTTTG CTGGAGGCAT TCGTTCTTCA GCTATTGAAG GTTGAGGCTG AAAGTAATGG TCAGGTCGTC TTTACCGATC AGAGTTCGCC CCATTCGCCA ATGGATGCCT ATGCCCCAAA AGGCTTTGGC CAAATACAAC ACCCATTGTC AATTGAAGTT ACACGAACGC TTACTCCTAA GAAGCTTGAG TCGATTCTTA AAACTCACTT CAATTACCGA CGGAGTGAAG AGGAAGGCAT TTTAATTGTT GCACTGCGTC AATTGGCGAA GGAAAGCGAT TATGTCAAGC ACTTAACACA GAAAGCAGCA GGTCGCCTAA TTATTTGGGG CGAAAGTGAA CTTGAGCAAC TTATCGAAAA ACACAGTCAG GCGGCTGACA AGCTCGCTAG CAAACTCTTT TCACTTAGAT TACAAATGGC TGTATCCCGC AACCCAGAAG ACTGGAAAGA AAAGAGGGAT CAAGTTGTTT TGGAAGTAAG TGAAAGCTAC CGCTCAGGAA GATTCTCGCT TGTCCTCGGT GCAGGTGTTT CAAGCAGCGC AGGCTTGCCC GACTGGGACA CACTTCTGAA CTCCCTCTTC GTATCCATGC TCACTGACGA AGATCTTAGT GACAAATCAC ATGATAACGA ACATGTTGCA AGCATCGTCA AGCGCCTAAG ACAAATTGAT GGCCCTTCGG CTTTAATGCT GGCGAGATAT ATAAGGAAAG GGCTTTCCGC AGGCTCTGAG AAAGAGCAAA AAGAATTTAT ACAAGCAGTT ACGACTCGAC TCTATTCATT ACGAAACAAA CAATACTCAC TCAGTTCGCC ACTAATTAAA GAGATCGCAA GCCTTTGCAC CCCGACCCGG ACAGGAGCCA AGGTTAGATC TGTAATAACA TACAACTTTG ACGATCTTAT GGAGCGAGAG TTAGAAGCTA GGAATCTCTC AATAAGAAGC ATTTTTGAAG AAGTTGAGCT GGCAGCACCT GAAGAATTAC CTATCTATCA TGTACATGGA TTTCTTCCAG AAAACCGCAC CAACTACTCC AACCTTGATC GAACAACGCT TGTTTTTTCT GAAGAAGGTT ACCACCAAAT ATATAGTGAA GCCTACCACT GGTCCAACTT AGTCCAACTA GCAAGTCTAA AGGAAACAAC TTGCCTAATG GTGGGGCTGT CATTGACCGA TCCTAACCTA AGAAGGCTTC TCGAAATCGC AGCAAAGTCA ACTGATCGAC CTAAACATTT TGCATTCCTA CCACGAGTGA GCTTGGAAAA GTTCACTAAA GATGATGGGA AAAATGTTGT TCGTGCGCCG ACTGGAGTTT CAAAAAGATT TCTGGATAGA CACCATAGTC TCAATGAAGA AGTAATGCGT GAATTGGGCG TTAATGTAAT TTGGTATGAA TCTTATGATG AGATACCTAA GATACTCCAC AGCATTGGGA AAGGCATCTA A
|
Protein sequence | MNLASLEERL ADYGSQGYFL LEAFVLQLLK VEAESNGQVV FTDQSSPHSP MDAYAPKGFG QIQHPLSIEV TRTLTPKKLE SILKTHFNYR RSEEEGILIV ALRQLAKESD YVKHLTQKAA GRLIIWGESE LEQLIEKHSQ AADKLASKLF SLRLQMAVSR NPEDWKEKRD QVVLEVSESY RSGRFSLVLG AGVSSSAGLP DWDTLLNSLF VSMLTDEDLS DKSHDNEHVA SIVKRLRQID GPSALMLARY IRKGLSAGSE KEQKEFIQAV TTRLYSLRNK QYSLSSPLIK EIASLCTPTR TGAKVRSVIT YNFDDLMERE LEARNLSIRS IFEEVELAAP EELPIYHVHG FLPENRTNYS NLDRTTLVFS EEGYHQIYSE AYHWSNLVQL ASLKETTCLM VGLSLTDPNL RRLLEIAAKS TDRPKHFAFL PRVSLEKFTK DDGKNVVRAP TGVSKRFLDR HHSLNEEVMR ELGVNVIWYE SYDEIPKILH SIGKGI
|
| |