Gene Shewana3_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0550 
Symbol 
ID4476511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp644599 
End bp645108 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content48% 
IMG OID639725082 
Producthypothetical protein 
Protein accessionYP_868195 
Protein GI117919003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG TAGAATTTTG GGACTTAGTG ACCCGCAGTG AGCCAGCGCA ATCCCAGGAA 
TCTTTAGCGC AGGCATTAAA GCAAAAGTTG GCAGCGCTGA GTGACGAAGA GTTAAAAGCC
TTCGATAAAT TGTTTGGCCA ACAGATGCGC CGAAGCTACT TATGGTCGGT GTGGGGAGCG
GCTTATATCA TCACGGGCTG TGATTCCGAT TATGCCTTTG CTGAATTTCG CGCGTTTCTG
ATCTCACTTG GGCAGGACCG TTATGAGGCG GTGATTGCCA ATCCCGACAC TTTGGCGCAG
TTATCAGCAT GGCCCGAGAA AGACGGCTAT GCCTATCCTT TTATCGAAGA TTACGACTTG
ATCGCGGGTC AACTATTTGA AGACAGAACG GGTAAGGAGT TGCCTTTTAT GCCATCGGGT
AAGGCGACAC CTGCGGGTAA AAAATTTAGC ACTAAGCCCA AAGATTTAAA GCAGCAATAT
CCTGAGCTTA GTGCGCGTTT TCCGTTTTAA
 
Protein sequence
MTDVEFWDLV TRSEPAQSQE SLAQALKQKL AALSDEELKA FDKLFGQQMR RSYLWSVWGA 
AYIITGCDSD YAFAEFRAFL ISLGQDRYEA VIANPDTLAQ LSAWPEKDGY AYPFIEDYDL
IAGQLFEDRT GKELPFMPSG KATPAGKKFS TKPKDLKQQY PELSARFPF