Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0467 |
Symbol | |
ID | 4476696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 541429 |
End bp | 543396 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725001 |
Product | hypothetical protein |
Protein accession | YP_868114 |
Protein GI | 117918922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAA TCTATCGACT CACGGTTCCC ATTCTCTTAG GTCTCACGCT CGGCGCCTGT GGCGGCAGTG ATGATGACGA TGAAGATCCT AGCCCCATTG AATCCCAGCA ATTTGCCATT AAAGGGACAG TAAAAGGGCT GACCAACACC CTAAAACTCA CCCTACAAAC CAATGGCCAG ACAGTAGAAA CGCTTTCTGT TCAAAGTGAT GGCACAGATA AGGCCTTTGC ATTTTCGAAT ATGCAGAATG AAGGCGTTAG CTTTGCCATT ACCGTCAATA CGCAGCCAAC GGCACAAACC TGTACCGTCG CTAATGGCAG CGGCACCTTA AGCCAGAGCA ATGCCGAAAC CGCCCTCGTC ACCTGTGAAA CCAATGCTAA TGCCGAATTA ACCGGGATCT TTAGGGATAG CCCAGTTGCC GGGATCCATT ATCAAACCGA CAGCCAAACC GATGGCACCA CCAGCGATAT TGGTGAGTTT CAATACTTAC AGGGGGAACA AGTCACCTTT TCGGTCGGCG CGATTCAGTT TCCCAGCACA GCTGCCAGCG CACTCGTCAC TCCCACCGAA ATTGCAGCGG GCAATGAGGT CACAAAGGTA AATATCCTGC AATTGCTGCA GACTTTAGAT CAGGACTGCG ATGTCGAAAA TGGCATTCAG ATCAAAAGCT CACACCATGA TCTGCTCGCC AATACCGTAC TGGATATCAG CAGTGCCGAT TTTGACTCCC AACTCAACAC CGCCTTTGCC AGCCTCGGTT CGGGTTTGAG TCTGATCAGC GAAGCCCAAG CCCTTAACCA TTTCGATACC TCCAATCGTA ATCTGCTGCT AGGTAGCTGG CTGCTGTCGG AAGGAGAAGG TCAAAGCAAC ATACTGACCT TTATCGACCA TAGCCGTTAT ATATTGATCC ACGAGCATGC GGGTGATGGC GATCAGGGTG CAGCCTCGGT CGAATACGGA AATTACACTT GGGATAGCGT GACGGGTAGT TTCAGCGTGA GTCTCATCGC TCAATCCGAT GGTTCCGGTG GCCTGTACGA TGAAAGTAGT GTCGTTAACA AGGCGATGGT AAGCCTCAAT ACCCTCACAC TGAGCCTCAC AGACAATGGT TCGTCAAGCA TCACACTCAC GCGTATCGAA GATGCTAGCG ATGCGTTAAT CGGCACCTGG CATGTGTACG ATCCCGAAAC CGATAACGAC AGCTTTGTGA CTTTCCTGCC CAATCAAGCC TATGCCATTG TGCATACCGC CAATTCCGAC AGCTATGAGG GGCAATCACC CCAAGCGCAA TCGGGGGAAT TTGGTCATTA CGTCAAAGAT GCCAGTGGCT ATAAGTTTAC CGCCAGTGTC GAGTCCGACG GCCCTAATGG CCTCTATGAT GCCCAGTCAG CCGACGCCCA TCAGTTTTCG TCCATCAGCA CCAGCCAATG GGGCGAGATG ATGGCCACAG AAAATGGCCC AGACGGCGGT ACTTTCACCT TAGATAAGGT CGGCAGTTTT GTGACAGAGT TAGTCGATAA GCCTTCCGCC GCAGGTACCA GCCTTGGACG CATCACCTCG GTGCGGGATA TCGAAGGCTT TAGCTACGAC GCCACAGTCA ATCGCCTGCT GCAATTTGAC GTAACCTTTG CCACGGACAC GCAAAACCGC TGCACCACAG AGTTCGCCAA TGGCCAATGC GGCGCGCGTT ACAACATGCT GGTGCAGAAT GTATCCGAGA ATGATATGGG GGATGTGATT GGCGAAATCA GCCTGAACGA AGTCACTAGC AATGCCCAAG TAAACAGCGA TTTTTATATG ACGACCGCTG GCACACTGCA CTTTGCCTTT AGTGGCAGTC AGACGATGAC CATCAGTCCT TTGTTAGGCA AATCTTGCCA AGGTAATCAA CGCGCTTTAG TGAGCTTAAC CGATACCAGC AGTAACCAAT CGCTTTGGTT AGTCGAGTTA ACCCCAGCCG CCCTATAG
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Protein sequence | MKPIYRLTVP ILLGLTLGAC GGSDDDDEDP SPIESQQFAI KGTVKGLTNT LKLTLQTNGQ TVETLSVQSD GTDKAFAFSN MQNEGVSFAI TVNTQPTAQT CTVANGSGTL SQSNAETALV TCETNANAEL TGIFRDSPVA GIHYQTDSQT DGTTSDIGEF QYLQGEQVTF SVGAIQFPST AASALVTPTE IAAGNEVTKV NILQLLQTLD QDCDVENGIQ IKSSHHDLLA NTVLDISSAD FDSQLNTAFA SLGSGLSLIS EAQALNHFDT SNRNLLLGSW LLSEGEGQSN ILTFIDHSRY ILIHEHAGDG DQGAASVEYG NYTWDSVTGS FSVSLIAQSD GSGGLYDESS VVNKAMVSLN TLTLSLTDNG SSSITLTRIE DASDALIGTW HVYDPETDND SFVTFLPNQA YAIVHTANSD SYEGQSPQAQ SGEFGHYVKD ASGYKFTASV ESDGPNGLYD AQSADAHQFS SISTSQWGEM MATENGPDGG TFTLDKVGSF VTELVDKPSA AGTSLGRITS VRDIEGFSYD ATVNRLLQFD VTFATDTQNR CTTEFANGQC GARYNMLVQN VSENDMGDVI GEISLNEVTS NAQVNSDFYM TTAGTLHFAF SGSQTMTISP LLGKSCQGNQ RALVSLTDTS SNQSLWLVEL TPAAL
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