| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0342 |
|---|
| Symbol | |
|---|
| ID | 4479078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 376857 |
|---|
| End bp | 377240 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639724874 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_867991 |
|---|
| Protein GI | 117918799 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4648] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.557264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTC TGCTACAAGT ACTAACCGCA CTCGCGCTGA TTGCTTATCC AGTCGCCGTG
TATTTAGGAC TGAATTATCT GCCAGCAGGC ACCATAGCCC TAGTGCTATG CCTCTTGTTG
GTAGTGCGTT TAATGCTGCA AAAGCAAAAG GTTAAAACCT TAGTTTTGCC TTTGCTTGTG
GGGATTGGGC TCACCGCGGG CAGTTTTGTC GCCAAACGCA GCGACTGGCT CTTGTATTAC
CCCGTGGTGA TAAACCTCAC CATGTTAGCC CTGTTTAGCT ACTCGCTATA CCAAGGCCCG
AGCATGATTG AACGGCTCGC ACGGCTCAAA GAGCCCGAAT TGCCGGATGA AGCCATAGGT
TTGTCTCGTC CTAAGATAGG TTGA
|
|---|
| Protein sequence | MRVLLQVLTA LALIAYPVAV YLGLNYLPAG TIALVLCLLL VVRLMLQKQK VKTLVLPLLV
GIGLTAGSFV AKRSDWLLYY PVVINLTMLA LFSYSLYQGP SMIERLARLK EPELPDEAIG
LSRPKIG
|
|---|
| |