| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0301 |
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| Symbol | |
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| ID | 4479460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 336865 |
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| End bp | 338676 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639724833 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_867950 |
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| Protein GI | 117918758 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00567265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTAGAGA ATTTACGTAA CATCGCCATT ATTGCGCACG TTGACCATGG CAAAACGACC
CTGGTTGACA AGCTGCTGTC GCAATCAGGA ACCCTTGCAA CCCGGGGAGA AGCTACTGAG
CGGGTGATGG ACTCCAACGA TCTTGAAAAG GAACGTGGGA TCACGATTCT GGCAAAGAAT
ACTGCCATCA AGTGGAACGA CTACCGCATT AACATCGTAG ACACCCCAGG CCACGCCGAC
TTCGGTGGTG AGGTTGAGCG CGTGCTGTCT ATGGTGGACT CAGTATTACT GCTGGTTGAC
GCCGTTGACG GTCCAATGCC ACAGACTCGC TTCGTAACCA AGAAAGCGTT CGCCCAAGGC
TTAAAGCCAA TCGTTGTTAT CAACAAGATT GACCGTCCTG GTGCTCGCCC TGATTGGGTT
ATCGACCAAG TATTCGACCT GTTCGACAAC TTAGGTGCGA CTGACGAGCA ATTAGATTTC
CCAGTGGTTT ACGCTTCTGC GTTAAACGGC TTTGCAACCT TAGATCCGGA CGAAGTTGGC
ACCGACATGA CGCCACTGTT CCAAACTATC GTTGAAAAAG TATCTTCACC TGCAGCTGAC
GCTGAAGGTC CATTCCAGAT GCAAATTTCT CAGCTCGATT ACAACTCATA CGTGGGGGTT
ATCGGTGTTG GCCGCATCAA GCGTGGTAGC ATCAAGACTA ACCAACAAGT GACCGTGATC
GGCGCCGATG GTAAGACTCG TAACGGTAAA ATGGGCCAAG TATTAGGTTA CATGGGCTTA
GAGCGTACCG AAGTTGACGT AGCAAACGCT GGCGACATCG TAGCGATTAC TGGTTTAGGT
GAGCTGAAGA TTTCTGACAC TGTGTGTGCC GCAGGTAATG TTGAAGCGCT GCCACCCCTG
TCTGTTGACG AACCAACACT GACCATGACT TTCCAAGTCA ACACTTCACC TTTCGCAGGT
AAAGAAGGTA AGTACGTGAC TTCACGTAAC ATTCTTGAGC GTCTGCAACA AGAATTAGTG
CACAACGTGG CACTGCGTGT TGAAGAAACC GACAGCCCAG ACCGTTTCGC GGTATCTGGC
CGTGGTGAAT TACACTTATC TATCCTGATC GAAAACATGC GTCGTGAAGG TTACGAATTA
GCGGTTTCTC GCCCAGAAGT TATCTTAAAA ACCATCGATG GCGAACTGTG TGAGCCATAC
GAGACGCTGA CCGTTGACGT TGAAGAAGAA CATCAAGGTA CAGTCATCGA GAAGCTGGGT
GTACGTAAGG CTGAGATGAA AGACATGCAG CTTGACGGTA AAGGCCGCGT GCGCGTTGAC
TTTATCATCC CAAGCCGTGG CTTAATCGGT TTCCAAACTG AGTTCTTAAC GGCAACTTCT
GGTACTGGTC TGATTTACCA CTCATTCGAT CACTACGGTC CGCACAAAGG TGGCGACATT
GGTCAACGTG CGAACGGCGT ATTGATCTCT AACGCGACCG GTAAGGCGCT AACATTCGCA
CTGTTCGGTC TGCAGGACCG CGGTCGTCTG TTTATCGGCC ACGCTGCCGA AGTTTACGAA
GGTCAAGTTG TGGGTATCCA CTCACGTTCT AACGACCTGA CAGTTAACTG TCTGAAAGGT
AAGCAGCTGA CTAACATGCG TGCTTCTGGT ACTGACGAAG CTCAAGTACT GACTACGCCA
ATCACCTTAA CTCTTGAGCA AGCACTTGAG TTTATCGATG ATGACGAATT AGTTGAAGTA
ACACCTAAGA GCATCCGTGT TCGTAAGAAA CACTTAACTG AAAACGACCG TAAGCGCGCT
AGCCGCGGCT AA
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| Protein sequence | MLENLRNIAI IAHVDHGKTT LVDKLLSQSG TLATRGEATE RVMDSNDLEK ERGITILAKN
TAIKWNDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTKKAFAQG
LKPIVVINKI DRPGARPDWV IDQVFDLFDN LGATDEQLDF PVVYASALNG FATLDPDEVG
TDMTPLFQTI VEKVSSPAAD AEGPFQMQIS QLDYNSYVGV IGVGRIKRGS IKTNQQVTVI
GADGKTRNGK MGQVLGYMGL ERTEVDVANA GDIVAITGLG ELKISDTVCA AGNVEALPPL
SVDEPTLTMT FQVNTSPFAG KEGKYVTSRN ILERLQQELV HNVALRVEET DSPDRFAVSG
RGELHLSILI ENMRREGYEL AVSRPEVILK TIDGELCEPY ETLTVDVEEE HQGTVIEKLG
VRKAEMKDMQ LDGKGRVRVD FIIPSRGLIG FQTEFLTATS GTGLIYHSFD HYGPHKGGDI
GQRANGVLIS NATGKALTFA LFGLQDRGRL FIGHAAEVYE GQVVGIHSRS NDLTVNCLKG
KQLTNMRASG TDEAQVLTTP ITLTLEQALE FIDDDELVEV TPKSIRVRKK HLTENDRKRA
SRG
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