Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0257 |
Symbol | |
ID | 4479165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 288404 |
End bp | 288817 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639724789 |
Product | outer membrane protein, putative |
Protein accession | YP_867906 |
Protein GI | 117918714 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0239703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000101201 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAC TATCTTTAGT TGCGGTATCT TTATTATCTG CATTAGTGGC CGGCCAAGCT TCAGCGGCAG CCGATACTAC AGGTTTTTAT GTGGGTGGCG CACTAAACCG CGTAGCTGTG GATGTTGTTG ATGATTCAGA TACTGGCACA GGTTTCGGTG TTTACGGTGG TTACAACTTC AACGAGTGGT TTGGTTTAGA AGCCAATTTA TTTGCGACGG CCGATTTGGG CGACAGAGAT ACGGATGTCA CCGCGGGCGC ATTAACCTTC ACGCCTAAGT TTACTTTGCA AATCAATGAT ATGTTCTCAG CTTATGCAAA AGTTGGTGTT GCATCTATGG CTATGAATTT TGACGGTTTT GGTTTCGATG AAGATTTCAC TTGGTTTTGG TTGGACATAT GGCGTAGGTA TTAA
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Protein sequence | MKKLSLVAVS LLSALVAGQA SAAADTTGFY VGGALNRVAV DVVDDSDTGT GFGVYGGYNF NEWFGLEANL FATADLGDRD TDVTAGALTF TPKFTLQIND MFSAYAKVGV ASMAMNFDGF GFDEDFTWFW LDIWRRY
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