| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3756 |
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| Symbol | |
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| ID | 4482040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4715244 |
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| End bp | 4716650 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724512 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_867647 |
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| Protein GI | 117927030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.043106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA CACCACTGTT GCATGAGCAG GATTGCATTA TTGGTATGGC AACGCCACCC
GGTACCTCAG GGGTTGCGGT GCTGCGCCTG AGCGGCCCTG GGGTGCTTTC GCTGGTGGTT
CCTTATCTTT ACACCCCCAA GGGTGAAAAG GTGGCAGAAA GCGGGTTTAA ACCCCGTGTG
ATGCGACGAT TGAATTTTAT CGATCCCCAA GCCCCGGATG TGCCGTTGGA TCATATGTTG
GTGGTGCATT TTCCTAATCC CCACTCATTT TCCGGTGAAG ATATGGTTGA GTTGCACGGT
CATGGTGCCC CAGTGGTGGT GAAACGGATC ATGGAAGTAT TGGTGGCTCA TGGTGTGCGG
CCAGCGGACC CTGGAGAGTT TTCTAAGCGG GCTTTTTTTA ATAATAAAAT GGATTTGGTG
CAGGCCGAAG CATTGATGGG GCTCATTGAA GCGACCTCGT TAAGGGCGGC GCGGGAGGCA
TCGCGACAGA TGACAGGAAC GCTCTCGGAG CATCTCATGG CGCTAAAAGA TCATTTGGTG
CTTACCTATG CGCATCTTGA GGCGGCCTTG GATTTTTCCG ATGAGGATAT TGAACCGGAG
AGCGAAGGGG GGCTATTGGA TCGTTTAGCT TATGTGCACG CGGGCATAAA AAAAATGCTG
GGTACAGCGG AGCTTGGGCG ACAGATGCGG GATGGTTTTG AACTCGCCAT CGTGGGGCGG
CCAAATGTTG GTAAGTCGAG CCTGTTTAAT GCGCTGTCAG GCGAGGATCG GGCGATTGTG
ACAGATTTAG CAGGAACAAC CCGTGATTTA AACGAAAGTA ATCTAGAAAT CCATGGTCTA
CCGATTTTAT TGGTGGATAC AGCCGGCTTA CGAGAGAGCG ATGACCCTGT GGAGCGTATT
GGTATTGAGC GCGCTTGGCA ACGGGTAGAG CGGGCCGATG GTATCGTGTT TGTGGCAGAA
GCGCAGCTTG GTGTGACGCT TGAGGATAAA GCGCTCTTAC AGCGTTTACC CAAAGAGAAG
GCGCTGTGGG TGTGGAATAA GCTGGATCAG TTGGAAGGGG CGCTCCCAGA GTGTTTGCAA
GATTGGCCGG AAGAGCAAAT ATGTGGGGTG TCATGCCATA CTGGGGAGGG GTTAGAAAGT
GTTGTTGCAC ACATTGTTGC ACGTATGGAG CAACTCCCTG AGCATGGGGA GGGGGTCGTT
ATTATGCAGT TGCGACAACA GCAAACATTA CAACAAGCTA TTGTATTAAT AGAAGAAGCA
CAGGAAATGT TGGCGAACGG CCAATGGCTG GAATTAGTAG CTGAGCCATT AACTAGGAGT
ATTGACCAAT TAACTCAATT AATGGGCAAT ACGGATTATG AGGATGTGTT AGGCATGGTA
TTTAGCAGTT TTTGTGTGGG GAAATGA
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| Protein sequence | MLRTPLLHEQ DCIIGMATPP GTSGVAVLRL SGPGVLSLVV PYLYTPKGEK VAESGFKPRV
MRRLNFIDPQ APDVPLDHML VVHFPNPHSF SGEDMVELHG HGAPVVVKRI MEVLVAHGVR
PADPGEFSKR AFFNNKMDLV QAEALMGLIE ATSLRAAREA SRQMTGTLSE HLMALKDHLV
LTYAHLEAAL DFSDEDIEPE SEGGLLDRLA YVHAGIKKML GTAELGRQMR DGFELAIVGR
PNVGKSSLFN ALSGEDRAIV TDLAGTTRDL NESNLEIHGL PILLVDTAGL RESDDPVERI
GIERAWQRVE RADGIVFVAE AQLGVTLEDK ALLQRLPKEK ALWVWNKLDQ LEGALPECLQ
DWPEEQICGV SCHTGEGLES VVAHIVARME QLPEHGEGVV IMQLRQQQTL QQAIVLIEEA
QEMLANGQWL ELVAEPLTRS IDQLTQLMGN TDYEDVLGMV FSSFCVGK
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